STRINGSTRING
AB675_9876 AB675_9876 AB675_5597 AB675_5597 AB675_5527 AB675_5527 AB675_9276 AB675_9276 AB675_9275 AB675_9275 AB675_8158 AB675_8158 AB675_8137 AB675_8137 AB675_10781 AB675_10781 AB675_7454 AB675_7454 AB675_5238 AB675_5238 AB675_5269 AB675_5269 AB675_4694 AB675_4694 AB675_4198 AB675_4198 AB675_3017 AB675_3017 AB675_1151 AB675_1151 AB675_3117 AB675_3117 AB675_3931 AB675_3931 AB675_10319 AB675_10319 AB675_3956 AB675_3956 AB675_11886 AB675_11886 AB675_8947 AB675_8947 AB675_11101 AB675_11101 AB675_1284 AB675_1284 AB675_11664 AB675_11664 AB675_9963 AB675_9963 AB675_4845 AB675_4845 AB675_2263 AB675_2263 AB675_10205 AB675_10205 AB675_10998 AB675_10998 AB675_3479 AB675_3479 AB675_1283 AB675_1283 AB675_4211 AB675_4211 AB675_9928 AB675_9928 AB675_1543 AB675_1543 AB675_3006 AB675_3006 AB675_8929 AB675_8929 AB675_4765 AB675_4765 AB675_11723 AB675_11723 AB675_2231 AB675_2231 AB675_2305 AB675_2305 AB675_2671 AB675_2671 AB675_2458 AB675_2458 AB675_8788 AB675_8788 AB675_6373 AB675_6373 AB675_1366 AB675_1366 AB675_10782 AB675_10782 AB675_8184 AB675_8184 AB675_3109 AB675_3109 AB675_5349 AB675_5349 AB675_5739 AB675_5739 AB675_198 AB675_198 AB675_6347 AB675_6347 AB675_8611 AB675_8611 AB675_7592 AB675_7592 AB675_2457 AB675_2457 AB675_2672 AB675_2672 AB675_476 AB675_476 AB675_9103 AB675_9103 AB675_2061 AB675_2061 AB675_2755 AB675_2755 AB675_1268 AB675_1268 AB675_8963 AB675_8963 AB675_5970 AB675_5970 AB675_1574 AB675_1574 AB675_10585 AB675_10585 AB675_5871 AB675_5871 AB675_6284 AB675_6284 AB675_7842 AB675_7842 AB675_4933 AB675_4933 AB675_11665 AB675_11665 AB675_1312 AB675_1312 AB675_10026 AB675_10026 AB675_3656 AB675_3656 AB675_1152 AB675_1152 AB675_5276 AB675_5276 AB675_4333 AB675_4333 AB675_3957 AB675_3957 AB675_10101 AB675_10101 AB675_7514 AB675_7514 AB675_7709 AB675_7709 AB675_12139 AB675_12139 AB675_9589 AB675_9589 AB675_9074 AB675_9074 AB675_7602 AB675_7602 AB675_6530 AB675_6530 AB675_9250 AB675_9250 AB675_2361 AB675_2361 AB675_9665 AB675_9665 AB675_6372 AB675_6372 AB675_8299 AB675_8299 AB675_886 AB675_886
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_9876Putative DNA helicase INO80. (1659 aa)
AB675_5597Rpb7-binding protein seb1. (633 aa)
AB675_5527TAFII28 domain-containing protein. (361 aa)
AB675_9276Putative transcriptional regulatory protein. (323 aa)
AB675_9275Uncharacterized protein. (135 aa)
AB675_8158Transcriptional activator protein DAL81. (413 aa)
AB675_8137Endoribonuclease ysh1. (831 aa)
AB675_10781Putative RNA polymerase II transcription factor B subunit 1. (158 aa)
AB675_7454DNA repair helicase rad15. (778 aa)
AB675_5238BTB domain-containing protein. (876 aa)
AB675_5269DUF3591 domain-containing protein. (1218 aa)
AB675_4694Transcription initiation factor TFIID subunit 9. (289 aa)
AB675_4198DNA-directed RNA polymerase II subunit RPB3. (199 aa)
AB675_3017DNA repair helicase RAD25. (838 aa)
AB675_1151Uncharacterized protein. (289 aa)
AB675_3117CTD kinase subunit alpha. (1093 aa)
AB675_3931Exosome complex component SKI6. (260 aa)
AB675_10319DNA polymerase epsilon subunit C. (316 aa)
AB675_3956DNA-directed RNA polymerase II subunit RPB1. (304 aa)
AB675_11886Chromatin structure-remodeling complex subunit RSC1. (990 aa)
AB675_8947RPOL4c domain-containing protein. (156 aa)
AB675_11101TATA-box-binding protein. (230 aa)
AB675_1284Transcription elongation factor spt6. (1188 aa)
AB675_11664DNA-directed RNA polymerase II subunit RPB2. (445 aa)
AB675_9963Transcriptional activator protein DAL81. (546 aa)
AB675_4845Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (667 aa)
AB675_2263Chromatin structure-remodeling complex subunit rsc7. (505 aa)
AB675_10205RNA polymerase II-associated protein RBA50. (430 aa)
AB675_10998RNA polymerase II transcription factor B subunit 4. (445 aa)
AB675_3479THO complex subunit 1. (697 aa)
AB675_1283Transcription elongation factor spt6. (303 aa)
AB675_4211DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
AB675_9928DNA-directed RNA polymerase II subunit RPB11. (167 aa)
AB675_1543Uncharacterized protein. (173 aa)
AB675_3006Transcription initiation factor TFIID subunit 5. (741 aa)
AB675_8929Protein polybromo-1. (578 aa)
AB675_4765Transcription elongation factor S-II. (307 aa)
AB675_11723Uncharacterized protein. (576 aa)
AB675_2231Uncharacterized protein. (525 aa)
AB675_2305DNA-directed RNA polymerase II subunit rpb7. (167 aa)
AB675_2671BTP domain-containing protein. (258 aa)
AB675_2458Uncharacterized protein. (324 aa)
AB675_8788Putative RNA-binding protein. (762 aa)
AB675_6373Transcriptional activator protein DAL81. (633 aa)
AB675_1366DUF4211 domain-containing protein. (609 aa)
AB675_10782Putative RNA polymerase II transcription factor B subunit 1. (452 aa)
AB675_8184Uncharacterized protein. (551 aa)
AB675_3109Pyrimidine pathway regulatory protein 1. (634 aa)
AB675_5349Uncharacterized protein. (343 aa)
AB675_5739Transcriptional activator protein DAL81. (520 aa)
AB675_198THO complex subunit 2. (2203 aa)
AB675_6347Transcription initiation factor TFIID subunit 12. (558 aa)
AB675_8611PCI domain-containing protein. (454 aa)
AB675_7592SAGA complex subunit spt3. (553 aa)
AB675_2457Uncharacterized protein. (357 aa)
AB675_2672Transcription initiation factor TFIID subunit 7. (701 aa)
AB675_476Serine/threonine-protein kinase KIN28; Belongs to the protein kinase superfamily. (415 aa)
AB675_9103Serine/threonine-protein kinase bur1. (623 aa)
AB675_2061DNA-directed RNA polymerases I, II, and III subunit RPABC5. (79 aa)
AB675_2755Acyl_transf_3 domain-containing protein. (510 aa)
AB675_1268Uncharacterized protein. (565 aa)
AB675_8963Uncharacterized protein. (319 aa)
AB675_5970Helicase SEN1. (2045 aa)
AB675_1574DNA-directed RNA polymerases I, II, and III subunit RPABC1. (237 aa)
AB675_10585Transcription initiation factor IIE subunit beta. (223 aa)
AB675_5871Uncharacterized protein. (465 aa)
AB675_6284Cell division control protein 73. (421 aa)
AB675_7842Transcription initiation factor IIA large subunit. (355 aa)
AB675_4933Transcription initiation factor IIF subunit beta. (383 aa)
AB675_11665DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family. (724 aa)
AB675_1312Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (403 aa)
AB675_10026Transcription initiation factor TFIID subunit 6. (505 aa)
AB675_3656Histone chaperone. (538 aa)
AB675_1152Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (114 aa)
AB675_5276Transcription initiation factor IIE subunit alpha. (492 aa)
AB675_4333Transcription initiation factor TFIID subunit 2. (1576 aa)
AB675_3957DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1431 aa)
AB675_10101Uncharacterized protein. (416 aa)
AB675_7514Transcription initiation factor IIB. (372 aa)
AB675_7709RNA polymerase-associated protein. (606 aa)
AB675_12139Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (232 aa)
AB675_9589Decapping nuclease rai1. (413 aa)
AB675_9074Cyclin CCL1; Belongs to the cyclin family. (401 aa)
AB675_7602Double-strand-specific pac1 ribonuclease. (311 aa)
AB675_6530Negative cofactor 2 complex subunit beta. (157 aa)
AB675_9250Uncharacterized protein. (258 aa)
AB675_2361DNA-directed RNA polymerases I, II, and III subunit RPABC2. (154 aa)
AB675_9665Tetratricopeptide repeat protein 1. (1223 aa)
AB675_6372Uncharacterized protein. (253 aa)
AB675_8299TAF8_C domain-containing protein. (334 aa)
AB675_886DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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