STRINGSTRING
AB675_1366 AB675_1366 AB675_4845 AB675_4845 AB675_9963 AB675_9963 AB675_8947 AB675_8947 AB675_10319 AB675_10319 AB675_1151 AB675_1151 AB675_3017 AB675_3017 AB675_4694 AB675_4694 AB675_5269 AB675_5269 AB675_7454 AB675_7454 AB675_8158 AB675_8158 AB675_9275 AB675_9275 AB675_9276 AB675_9276 AB675_5527 AB675_5527 AB675_6373 AB675_6373 AB675_2305 AB675_2305 AB675_4765 AB675_4765 AB675_3006 AB675_3006 AB675_5349 AB675_5349 AB675_5739 AB675_5739 AB675_6347 AB675_6347 AB675_2672 AB675_2672 AB675_2755 AB675_2755 AB675_10585 AB675_10585 AB675_7842 AB675_7842 AB675_4933 AB675_4933 AB675_1312 AB675_1312 AB675_10026 AB675_10026 AB675_1152 AB675_1152 AB675_5276 AB675_5276 AB675_4333 AB675_4333 AB675_7514 AB675_7514 AB675_12139 AB675_12139 AB675_6530 AB675_6530 AB675_9250 AB675_9250 AB675_6372 AB675_6372 AB675_8299 AB675_8299 AB675_886 AB675_886
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_1366DUF4211 domain-containing protein. (609 aa)
AB675_4845Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (667 aa)
AB675_9963Transcriptional activator protein DAL81. (546 aa)
AB675_8947RPOL4c domain-containing protein. (156 aa)
AB675_10319DNA polymerase epsilon subunit C. (316 aa)
AB675_1151Uncharacterized protein. (289 aa)
AB675_3017DNA repair helicase RAD25. (838 aa)
AB675_4694Transcription initiation factor TFIID subunit 9. (289 aa)
AB675_5269DUF3591 domain-containing protein. (1218 aa)
AB675_7454DNA repair helicase rad15. (778 aa)
AB675_8158Transcriptional activator protein DAL81. (413 aa)
AB675_9275Uncharacterized protein. (135 aa)
AB675_9276Putative transcriptional regulatory protein. (323 aa)
AB675_5527TAFII28 domain-containing protein. (361 aa)
AB675_6373Transcriptional activator protein DAL81. (633 aa)
AB675_2305DNA-directed RNA polymerase II subunit rpb7. (167 aa)
AB675_4765Transcription elongation factor S-II. (307 aa)
AB675_3006Transcription initiation factor TFIID subunit 5. (741 aa)
AB675_5349Uncharacterized protein. (343 aa)
AB675_5739Transcriptional activator protein DAL81. (520 aa)
AB675_6347Transcription initiation factor TFIID subunit 12. (558 aa)
AB675_2672Transcription initiation factor TFIID subunit 7. (701 aa)
AB675_2755Acyl_transf_3 domain-containing protein. (510 aa)
AB675_10585Transcription initiation factor IIE subunit beta. (223 aa)
AB675_7842Transcription initiation factor IIA large subunit. (355 aa)
AB675_4933Transcription initiation factor IIF subunit beta. (383 aa)
AB675_1312Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (403 aa)
AB675_10026Transcription initiation factor TFIID subunit 6. (505 aa)
AB675_1152Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (114 aa)
AB675_5276Transcription initiation factor IIE subunit alpha. (492 aa)
AB675_4333Transcription initiation factor TFIID subunit 2. (1576 aa)
AB675_7514Transcription initiation factor IIB. (372 aa)
AB675_12139Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (232 aa)
AB675_6530Negative cofactor 2 complex subunit beta. (157 aa)
AB675_9250Uncharacterized protein. (258 aa)
AB675_6372Uncharacterized protein. (253 aa)
AB675_8299TAF8_C domain-containing protein. (334 aa)
AB675_886DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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