STRINGSTRING
AB675_2457 AB675_2457 AB675_4845 AB675_4845 AB675_11101 AB675_11101 AB675_10319 AB675_10319 AB675_5269 AB675_5269 AB675_10585 AB675_10585 AB675_10026 AB675_10026 AB675_1152 AB675_1152 AB675_7514 AB675_7514 AB675_8299 AB675_8299 AB675_5238 AB675_5238
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_2457Uncharacterized protein. (357 aa)
AB675_4845Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (667 aa)
AB675_11101TATA-box-binding protein. (230 aa)
AB675_10319DNA polymerase epsilon subunit C. (316 aa)
AB675_5269DUF3591 domain-containing protein. (1218 aa)
AB675_10585Transcription initiation factor IIE subunit beta. (223 aa)
AB675_10026Transcription initiation factor TFIID subunit 6. (505 aa)
AB675_1152Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (114 aa)
AB675_7514Transcription initiation factor IIB. (372 aa)
AB675_8299TAF8_C domain-containing protein. (334 aa)
AB675_5238BTB domain-containing protein. (876 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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