11 items (Phialophora attae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AB675_8666	Uncharacterized protein. (105 aa)
	AB675_10165	Lovastatin diketide synthase LovF. (2468 aa)
	AB675_8970	Hydroxamate-type ferrichrome siderophore peptide synthetase. (3659 aa)
	AB675_2966	Conidial yellow pigment biosynthesis polyketide synthase. (2145 aa)
	AB675_3398	4-carboxymuconolactone decarboxylase. (150 aa)
	AB675_5622	Mono(ADP-ribosyl)transferase SpvB. (2561 aa)
	AB675_9823	4-carboxymuconolactone decarboxylase. (143 aa)
	AB675_292	Uncharacterized protein. (357 aa)
	AB675_2445	Lovastatin diketide synthase LovF. (2497 aa)
	AB675_8969	Nonribosomal peptide synthetase 2. (1180 aa)
	AB675_7341	VWFA domain-containing protein. (764 aa)

Your Current Organism:

Phialophora attae

NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AB675_10165	AB675_3398	A0A0N0NI03	A0A0N0NM20	Lovastatin diketide synthase LovF.	4-carboxymuconolactone decarboxylase.	0.635
AB675_10165	AB675_7341	A0A0N0NI03	A0A0N1NX30	Lovastatin diketide synthase LovF.	VWFA domain-containing protein.	0.635
AB675_10165	AB675_8666	A0A0N0NI03	A0A0N1P1A9	Lovastatin diketide synthase LovF.	Uncharacterized protein.	0.682
AB675_10165	AB675_8969	A0A0N0NI03	A0A0N1NWT5	Lovastatin diketide synthase LovF.	Nonribosomal peptide synthetase 2.	0.648
AB675_10165	AB675_8970	A0A0N0NI03	A0A0N0NJ29	Lovastatin diketide synthase LovF.	Hydroxamate-type ferrichrome siderophore peptide synthetase.	0.682
AB675_10165	AB675_9823	A0A0N0NI03	A0A0N1H7K1	Lovastatin diketide synthase LovF.	4-carboxymuconolactone decarboxylase.	0.635
AB675_2445	AB675_3398	A0A0N1HGB5	A0A0N0NM20	Lovastatin diketide synthase LovF.	4-carboxymuconolactone decarboxylase.	0.635
AB675_2445	AB675_7341	A0A0N1HGB5	A0A0N1NX30	Lovastatin diketide synthase LovF.	VWFA domain-containing protein.	0.635
AB675_2445	AB675_8666	A0A0N1HGB5	A0A0N1P1A9	Lovastatin diketide synthase LovF.	Uncharacterized protein.	0.682
AB675_2445	AB675_8969	A0A0N1HGB5	A0A0N1NWT5	Lovastatin diketide synthase LovF.	Nonribosomal peptide synthetase 2.	0.648
AB675_2445	AB675_8970	A0A0N1HGB5	A0A0N0NJ29	Lovastatin diketide synthase LovF.	Hydroxamate-type ferrichrome siderophore peptide synthetase.	0.682
AB675_2445	AB675_9823	A0A0N1HGB5	A0A0N1H7K1	Lovastatin diketide synthase LovF.	4-carboxymuconolactone decarboxylase.	0.635
AB675_292	AB675_3398	A0A0N1HC25	A0A0N0NM20	Uncharacterized protein.	4-carboxymuconolactone decarboxylase.	0.635
AB675_292	AB675_7341	A0A0N1HC25	A0A0N1NX30	Uncharacterized protein.	VWFA domain-containing protein.	0.635
AB675_292	AB675_8666	A0A0N1HC25	A0A0N1P1A9	Uncharacterized protein.	Uncharacterized protein.	0.682
AB675_292	AB675_8969	A0A0N1HC25	A0A0N1NWT5	Uncharacterized protein.	Nonribosomal peptide synthetase 2.	0.648
AB675_292	AB675_8970	A0A0N1HC25	A0A0N0NJ29	Uncharacterized protein.	Hydroxamate-type ferrichrome siderophore peptide synthetase.	0.682
AB675_292	AB675_9823	A0A0N1HC25	A0A0N1H7K1	Uncharacterized protein.	4-carboxymuconolactone decarboxylase.	0.635
AB675_2966	AB675_3398	A0A0N0NJB9	A0A0N0NM20	Conidial yellow pigment biosynthesis polyketide synthase.	4-carboxymuconolactone decarboxylase.	0.635
AB675_2966	AB675_7341	A0A0N0NJB9	A0A0N1NX30	Conidial yellow pigment biosynthesis polyketide synthase.	VWFA domain-containing protein.	0.635