STRINGSTRING
AB675_4230 AB675_4230 AB675_7189 AB675_7189 AB675_8895 AB675_8895 AB675_6068 AB675_6068 AB675_9999 AB675_9999 AB675_3667 AB675_3667 AB675_4518 AB675_4518 AB675_1743 AB675_1743 RPS0 RPS0 AB675_6902 AB675_6902 AB675_6454 AB675_6454 AB675_2809 AB675_2809 TIF6 TIF6 AB675_8961 AB675_8961 AB675_7979 AB675_7979 AB675_4340 AB675_4340 AB675_4235 AB675_4235 AB675_2016 AB675_2016 AB675_8321 AB675_8321 AB675_616 AB675_616 AB675_9360 AB675_9360 AB675_9672 AB675_9672 AB675_2229 AB675_2229 AB675_8324 AB675_8324 AB675_11673 AB675_11673 AB675_566 AB675_566 AB675_9444 AB675_9444 AB675_7194 AB675_7194 AB675_11554 AB675_11554 AB675_4520 AB675_4520 AB675_5435 AB675_5435 AB675_12140 AB675_12140 AB675_7906 AB675_7906 AB675_4505 AB675_4505 AB675_11283 AB675_11283 AB675_1866 AB675_1866 AB675_7135 AB675_7135
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_4230Ribosome assembly protein 1. (1088 aa)
AB675_718960S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
AB675_8895Brix domain-containing protein. (392 aa)
AB675_6068Putative WD repeat-containing protein C25H1.08c. (465 aa)
AB675_9999Ribosome biogenesis protein brx1. (336 aa)
AB675_3667Ribosomal RNA-processing protein 7. (299 aa)
AB675_4518rRNA biogenesis protein rrp5. (1771 aa)
AB675_1743Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (362 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (289 aa)
AB675_690260S ribosomal protein L5. (300 aa)
AB675_6454Uncharacterized protein. (271 aa)
AB675_2809Histidine protein methyltransferase 1. (339 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (256 aa)
AB675_896140S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (129 aa)
AB675_797940S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
AB675_434040S ribosomal protein S19. (154 aa)
AB675_4235Ribosome assembly factor mrt4. (203 aa)
AB675_2016Multiple RNA-binding domain-containing protein 1. (768 aa)
AB675_8321Ribosome biogenesis protein SSF1. (482 aa)
AB675_616Ribosome assembly protein 4. (630 aa)
AB675_936060S ribosomal protein L25. (156 aa)
AB675_9672Large subunit GTPase 1. (641 aa)
AB675_2229ATP-dependent RNA helicase DRS1. (822 aa)
AB675_8324Mitochondrial acidic protein MAM33. (304 aa)
AB675_11673Ribosome maturation protein SBDS. (364 aa)
AB675_56640S ribosomal protein S28. (68 aa)
AB675_9444Ribosomal_S7 domain-containing protein. (392 aa)
AB675_7194Putative eukaryotic translation initiation factor 5. (420 aa)
AB675_11554Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4628 aa)
AB675_4520RNA exonuclease 4. (391 aa)
AB675_5435Periodic tryptophan-like protein. (902 aa)
AB675_1214037S ribosomal protein S19, mitochondrial; Belongs to the universal ribosomal protein uS19 family. (80 aa)
AB675_790640S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (215 aa)
AB675_4505Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (431 aa)
AB675_1128360S ribosomal protein L10-A. (257 aa)
AB675_186660S ribosomal protein L6-B. (202 aa)
AB675_713560S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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