STRINGSTRING
AB675_7189 AB675_7189 AB675_11694 AB675_11694 AB675_8895 AB675_8895 AB675_6068 AB675_6068 AB675_9999 AB675_9999 AB675_3220 AB675_3220 AB675_1177 AB675_1177 AB675_12142 AB675_12142 AB675_4518 AB675_4518 AB675_4648 AB675_4648 AB675_9327 AB675_9327 AB675_5395 AB675_5395 AB675_9858 AB675_9858 AB675_6910 AB675_6910 AB675_7156 AB675_7156 AB675_6902 AB675_6902 AB675_2809 AB675_2809 AB675_2770 AB675_2770 TIF6 TIF6 AB675_521 AB675_521 AB675_478 AB675_478 AB675_11133 AB675_11133 AB675_1705 AB675_1705 AB675_8979 AB675_8979 AB675_4855 AB675_4855 AB675_1703 AB675_1703 SPB1 SPB1 AB675_4235 AB675_4235 AB675_4535 AB675_4535 AB675_2059 AB675_2059 AB675_8321 AB675_8321 AB675_616 AB675_616 YTM1 YTM1 AB675_9360 AB675_9360 AB675_9672 AB675_9672 AB675_2229 AB675_2229 AB675_2041 AB675_2041 AB675_6856 AB675_6856 AB675_6297 AB675_6297 AB675_6442 AB675_6442 AB675_8450 AB675_8450 AB675_3790 AB675_3790 AB675_11554 AB675_11554 AB675_4520 AB675_4520 AB675_9368 AB675_9368 AB675_4346 AB675_4346 AB675_5226 AB675_5226 AB675_3350 AB675_3350 AB675_9579 AB675_9579 ERB1 ERB1 AB675_9589 AB675_9589 AB675_4505 AB675_4505 AB675_2060 AB675_2060 AB675_11283 AB675_11283 NOP7 NOP7 AB675_1866 AB675_1866 AB675_7135 AB675_7135 AB675_5652 AB675_5652
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_718960S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
AB675_11694Ribosomal RNA-processing protein 15. (275 aa)
AB675_8895Brix domain-containing protein. (392 aa)
AB675_6068Putative WD repeat-containing protein C25H1.08c. (465 aa)
AB675_9999Ribosome biogenesis protein brx1. (336 aa)
AB675_322025S rRNA (Cytosine-C(5))-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (785 aa)
AB675_1177Box C/D snoRNA protein 1. (333 aa)
AB675_12142rRNA-processing protein EBP2. (419 aa)
AB675_4518rRNA biogenesis protein rrp5. (1771 aa)
AB675_464860S ribosomal protein L26-1. (138 aa)
AB675_9327Protein MAK16; Belongs to the MAK16 family. (312 aa)
AB675_5395Translation initiation factor RLI1. (572 aa)
AB675_9858Ribosome production factor 1. (426 aa)
AB675_6910Putative ribosome biogenesis protein C8F11.04. (382 aa)
AB675_7156Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (255 aa)
AB675_690260S ribosomal protein L5. (300 aa)
AB675_2809Histidine protein methyltransferase 1. (339 aa)
AB675_277060S ribosomal protein L33-B. (108 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (256 aa)
AB675_521Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (222 aa)
AB675_478Uncharacterized protein. (145 aa)
AB675_11133Pumilio homology domain family member 6. (649 aa)
AB675_1705Uncharacterized protein. (430 aa)
AB675_8979Putative RNA-binding protein. (481 aa)
AB675_4855Ribosome biogenesis protein nsa2. (261 aa)
AB675_1703Uncharacterized protein. (271 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (827 aa)
AB675_4235Ribosome assembly factor mrt4. (203 aa)
AB675_4535Nucleolar pre-ribosomal-associated protein 1. (1163 aa)
AB675_2059Nucleolar complex protein 2. (588 aa)
AB675_8321Ribosome biogenesis protein SSF1. (482 aa)
AB675_616Ribosome assembly protein 4. (630 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (462 aa)
AB675_936060S ribosomal protein L25. (156 aa)
AB675_9672Large subunit GTPase 1. (641 aa)
AB675_2229ATP-dependent RNA helicase DRS1. (822 aa)
AB675_2041Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (679 aa)
AB675_685660S ribosomal protein L14-B. (146 aa)
AB675_6297Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (207 aa)
AB675_6442Putative AAA domain-containing protein. (789 aa)
AB675_8450Uncharacterized protein. (549 aa)
AB675_3790Ribosomal RNA-processing protein 14. (534 aa)
AB675_11554Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4628 aa)
AB675_4520RNA exonuclease 4. (391 aa)
AB675_936860S ribosomal subunit assembly/export protein LOC1. (201 aa)
AB675_434660S ribosomal protein L7. (253 aa)
AB675_5226ATP-dependent RNA helicase dbp9. (607 aa)
AB675_3350WD repeat-containing protein jip5. (441 aa)
AB675_9579ATPase family protein. (751 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1342 aa)
AB675_9589Decapping nuclease rai1. (413 aa)
AB675_4505Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (431 aa)
AB675_2060Putative NOC2 family protein. (113 aa)
AB675_1128360S ribosomal protein L10-A. (257 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (705 aa)
AB675_186660S ribosomal protein L6-B. (202 aa)
AB675_713560S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
AB675_5652Putative RNA-binding protein. (801 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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