STRINGSTRING
AB675_11402 AB675_11402 AB675_11362 AB675_11362 AB675_9635 AB675_9635 AB675_6904 AB675_6904 AB675_10113 AB675_10113 AB675_1256 AB675_1256 AB675_3851 AB675_3851 AB675_2016 AB675_2016 AB675_2409 AB675_2409 AB675_8303 AB675_8303 AB675_2724 AB675_2724
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_11402U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (565 aa)
AB675_11362Uncharacterized protein. (327 aa)
AB675_9635Single-stranded TG1-3 DNA-binding protein. (301 aa)
AB675_6904Phosphoinositide phospholipase C. (1116 aa)
AB675_10113Beta-lactamase domain-containing protein. (480 aa)
AB675_1256RRM domain-containing protein. (1128 aa)
AB675_3851Pre-mRNA-splicing factor srp1. (227 aa)
AB675_2016Multiple RNA-binding domain-containing protein 1. (768 aa)
AB675_2409Phosphoinositide phospholipase C. (592 aa)
AB675_8303Uncharacterized protein. (618 aa)
AB675_2724Phosphoinositide phospholipase C. (589 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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