STRINGSTRING
AB675_333 AB675_333 AB675_2985 AB675_2985 AB675_2906 AB675_2906 AB675_10384 AB675_10384 AB675_4274 AB675_4274 AB675_5813 AB675_5813 AB675_11402 AB675_11402 AB675_11525 AB675_11525 AB675_2458 AB675_2458 AB675_2378 AB675_2378 AB675_4259 AB675_4259 AB675_4919 AB675_4919 AB675_5723 AB675_5723 AB675_1664 AB675_1664 AB675_3479 AB675_3479 AB675_10458 AB675_10458 AB675_5359 AB675_5359 AB675_10360 AB675_10360 AB675_6822 AB675_6822 AB675_11536 AB675_11536 AB675_10586 AB675_10586 AB675_2814 AB675_2814 AB675_9652 AB675_9652 AB675_9548 AB675_9548 AB675_6429 AB675_6429 AB675_8661 AB675_8661 AB675_328 AB675_328 AB675_4758 AB675_4758 AB675_10647 AB675_10647 AB675_9308 AB675_9308 AB675_3350 AB675_3350 AB675_4042 AB675_4042 AB675_4618 AB675_4618 AB675_1836 AB675_1836 AB675_1847 AB675_1847
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_333Putative THOC5 family protein. (211 aa)
AB675_2985Nucleoporin nup44. (384 aa)
AB675_2906Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (885 aa)
AB675_10384Putative nucleoporin. (1345 aa)
AB675_4274Ran-specific GTPase-activating protein 1. (233 aa)
AB675_5813Nucleoporin NIC96. (1157 aa)
AB675_11402U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (565 aa)
AB675_11525Nucleoporin nup82. (895 aa)
AB675_2458Uncharacterized protein. (324 aa)
AB675_2378mRNA export factor MEX67. (492 aa)
AB675_4259Uncharacterized protein. (851 aa)
AB675_4919Uncharacterized protein. (1318 aa)
AB675_5723Nucleoporin. (1387 aa)
AB675_1664Nucleoporin. (1719 aa)
AB675_3479THO complex subunit 1. (697 aa)
AB675_10458Nucleoporin. (1802 aa)
AB675_5359Uncharacterized protein. (156 aa)
AB675_10360Splicing factor U2AF 23 kDa subunit. (185 aa)
AB675_6822Pre-mRNA-splicing factor slu7. (506 aa)
AB675_11536Nucleoporin. (1506 aa)
AB675_10586Nucleoprotein TPR. (1912 aa)
AB675_2814Uncharacterized protein. (440 aa)
AB675_9652Putative RNA-binding protein. (348 aa)
AB675_9548RNA-binding protein with serine-rich domain 1-B. (288 aa)
AB675_6429Nuclear envelope protein ndc1. (681 aa)
AB675_8661THO complex subunit 3. (344 aa)
AB675_328Pre-mRNA-processing factor 17. (588 aa)
AB675_4758Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16. (1003 aa)
AB675_10647Nucleoporin. (1836 aa)
AB675_9308PWI domain-containing protein. (290 aa)
AB675_3350WD repeat-containing protein jip5. (441 aa)
AB675_4042Poly(A)+ RNA export protein. (360 aa)
AB675_4618RNA-binding protein 8A. (167 aa)
AB675_1836Uncharacterized protein. (686 aa)
AB675_1847Ran-specific GTPase-activating protein 2. (566 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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