13 items (Phialophora attae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AB675_534	Uncharacterized protein. (404 aa)
	AB675_5943	BZIP domain-containing protein. (260 aa)
	AB675_7782	Serine/threonine-protein kinase ksg1. (861 aa)
	AB675_8819	Ubiquitin-40S ribosomal protein S27a. (158 aa)
	AB675_11957	Uncharacterized protein. (426 aa)
	AB675_4155	Protein kinase C-like protein. (578 aa)
	AB675_2724	Phosphoinositide phospholipase C. (589 aa)
	AB675_12027	Ubiquitin-60S ribosomal protein L40. (465 aa)
	AB675_6904	Phosphoinositide phospholipase C. (1116 aa)
	AB675_7102	F-box/WD repeat-containing protein lin-23. (933 aa)
	AB675_6257	Beta-TrCP. (715 aa)
	AB675_4156	Non-specific serine/threonine protein kinase. (577 aa)
	AB675_2409	Phosphoinositide phospholipase C. (592 aa)

Your Current Organism:

Phialophora attae

NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AB675_11957	AB675_4155	A0A0N1NVG3	A0A0N1P075	Uncharacterized protein.	Protein kinase C-like protein.	0.796
AB675_11957	AB675_4156	A0A0N1NVG3	A0A0N1H2D3	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.796
AB675_12027	AB675_6257	A0A0N0NKU8	A0A0N0NQJ0	Ubiquitin-60S ribosomal protein L40.	Beta-TrCP.	0.694
AB675_12027	AB675_7102	A0A0N0NKU8	A0A0N0NQD6	Ubiquitin-60S ribosomal protein L40.	F-box/WD repeat-containing protein lin-23.	0.694
AB675_2409	AB675_4155	A0A0N1HB31	A0A0N1P075	Phosphoinositide phospholipase C.	Protein kinase C-like protein.	0.578
AB675_2409	AB675_4156	A0A0N1HB31	A0A0N1H2D3	Phosphoinositide phospholipase C.	Non-specific serine/threonine protein kinase.	0.578
AB675_2724	AB675_4155	A0A0N1P206	A0A0N1P075	Phosphoinositide phospholipase C.	Protein kinase C-like protein.	0.578
AB675_2724	AB675_4156	A0A0N1P206	A0A0N1H2D3	Phosphoinositide phospholipase C.	Non-specific serine/threonine protein kinase.	0.578
AB675_4155	AB675_11957	A0A0N1P075	A0A0N1NVG3	Protein kinase C-like protein.	Uncharacterized protein.	0.796
AB675_4155	AB675_2409	A0A0N1P075	A0A0N1HB31	Protein kinase C-like protein.	Phosphoinositide phospholipase C.	0.578
AB675_4155	AB675_2724	A0A0N1P075	A0A0N1P206	Protein kinase C-like protein.	Phosphoinositide phospholipase C.	0.578
AB675_4155	AB675_4156	A0A0N1P075	A0A0N1H2D3	Protein kinase C-like protein.	Non-specific serine/threonine protein kinase.	0.899
AB675_4155	AB675_534	A0A0N1P075	A0A0N1HHJ1	Protein kinase C-like protein.	Uncharacterized protein.	0.796
AB675_4155	AB675_6904	A0A0N1P075	A0A0N0NPW6	Protein kinase C-like protein.	Phosphoinositide phospholipase C.	0.578
AB675_4155	AB675_7782	A0A0N1P075	A0A0N1HU40	Protein kinase C-like protein.	Serine/threonine-protein kinase ksg1.	0.923
AB675_4156	AB675_11957	A0A0N1H2D3	A0A0N1NVG3	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.796
AB675_4156	AB675_2409	A0A0N1H2D3	A0A0N1HB31	Non-specific serine/threonine protein kinase.	Phosphoinositide phospholipase C.	0.578
AB675_4156	AB675_2724	A0A0N1H2D3	A0A0N1P206	Non-specific serine/threonine protein kinase.	Phosphoinositide phospholipase C.	0.578
AB675_4156	AB675_4155	A0A0N1H2D3	A0A0N1P075	Non-specific serine/threonine protein kinase.	Protein kinase C-like protein.	0.899
AB675_4156	AB675_534	A0A0N1H2D3	A0A0N1HHJ1	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.796