STRINGSTRING
AB675_919 AB675_919 AB675_8440 AB675_8440 AB675_10628 AB675_10628 AB675_2905 AB675_2905 AB675_2670 AB675_2670 AB675_2124 AB675_2124 AB675_7578 AB675_7578 AB675_11536 AB675_11536 AB675_7832 AB675_7832 AB675_2802 AB675_2802 AB675_2464 AB675_2464 AB675_6376 AB675_6376 AB675_1942 AB675_1942 AB675_10645 AB675_10645
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_919Uncharacterized protein. (324 aa)
AB675_8440Nucleoporin NSP1. (693 aa)
AB675_10628Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (306 aa)
AB675_2905Ubiquitin-like protein SMT3. (96 aa)
AB675_2670Uncharacterized protein. (729 aa)
AB675_2124SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
AB675_7578DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1678 aa)
AB675_11536Nucleoporin. (1506 aa)
AB675_7832Ubiquitin-like protein SMT3. (105 aa)
AB675_2802DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (875 aa)
AB675_2464Uncharacterized protein. (370 aa)
AB675_6376Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (405 aa)
AB675_1942RanBD1 domain-containing protein. (1465 aa)
AB675_10645Vezatin domain-containing protein. (423 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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