STRINGSTRING
AB675_4950 AB675_4950 AB675_3779 AB675_3779 AB675_1373 AB675_1373 AB675_11664 AB675_11664 AB675_8947 AB675_8947 AB675_6079 AB675_6079 AB675_3956 AB675_3956 AB675_3017 AB675_3017 AB675_11965 AB675_11965 AB675_4299 AB675_4299 AB675_12027 AB675_12027 AB675_4198 AB675_4198 AB675_3484 AB675_3484 AB675_11361 AB675_11361 AB675_11362 AB675_11362 AB675_7454 AB675_7454 AB675_10781 AB675_10781 AB675_9108 AB675_9108 AB675_9350 AB675_9350 AB675_5311 AB675_5311 AB675_5654 AB675_5654 AB675_6650 AB675_6650 AB675_6649 AB675_6649 AB675_8452 AB675_8452 AB675_2758 AB675_2758 AB675_2305 AB675_2305 AB675_4765 AB675_4765 AB675_9928 AB675_9928 AB675_4211 AB675_4211 AB675_10998 AB675_10998 AB675_4800 AB675_4800 AB675_10782 AB675_10782 AB675_3930 AB675_3930 AB675_987 AB675_987 AB675_4719 AB675_4719 AB675_3478 AB675_3478 AB675_2304 AB675_2304 AB675_11272 AB675_11272 AB675_280 AB675_280 AB675_476 AB675_476 AB675_415 AB675_415 AB675_10564 AB675_10564 AB675_7963 AB675_7963 AB675_2061 AB675_2061 AB675_2044 AB675_2044 AB675_1574 AB675_1574 AB675_5943 AB675_5943 AB675_10043 AB675_10043 AB675_3486 AB675_3486 AB675_8819 AB675_8819 AB675_4082 AB675_4082 AB675_10930 AB675_10930 AB675_11665 AB675_11665 AB675_2970 AB675_2970 AB675_4338 AB675_4338 AB675_1327 AB675_1327 AB675_1141 AB675_1141 AB675_4529 AB675_4529 AB675_3957 AB675_3957 AB675_11966 AB675_11966 AB675_4519 AB675_4519 AB675_9517 AB675_9517 AB675_7482 AB675_7482 AB675_9679 AB675_9679 AB675_2030 AB675_2030 AB675_9074 AB675_9074 AB675_2361 AB675_2361 AB675_8652 AB675_8652 AB675_1915 AB675_1915 AB675_886 AB675_886
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_4950Pre-mRNA-processing factor 19. (504 aa)
AB675_3779Uncharacterized protein. (326 aa)
AB675_1373DNA polymerase delta subunit 3. (446 aa)
AB675_11664DNA-directed RNA polymerase II subunit RPB2. (445 aa)
AB675_8947RPOL4c domain-containing protein. (156 aa)
AB675_6079COP9 signalosome complex subunit 6. (411 aa)
AB675_3956DNA-directed RNA polymerase II subunit RPB1. (304 aa)
AB675_3017DNA repair helicase RAD25. (838 aa)
AB675_11965Cullin-4A; Belongs to the cullin family. (887 aa)
AB675_4299Replication factor C subunit 5. (355 aa)
AB675_12027Ubiquitin-60S ribosomal protein L40. (465 aa)
AB675_4198DNA-directed RNA polymerase II subunit RPB3. (199 aa)
AB675_3484DNA repair protein rad13. (1366 aa)
AB675_11361Transcription factor bye1. (928 aa)
AB675_11362Uncharacterized protein. (327 aa)
AB675_7454DNA repair helicase rad15. (778 aa)
AB675_10781Putative RNA polymerase II transcription factor B subunit 1. (158 aa)
AB675_9108DNA repair protein rad16. (954 aa)
AB675_9350RING-box protein 1. (125 aa)
AB675_5311Uncharacterized protein. (146 aa)
AB675_5654Mating-type switching protein swi10. (366 aa)
AB675_6650Replication factor C subunit 1. (613 aa)
AB675_6649Replication factor C subunit 1. (449 aa)
AB675_8452RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (493 aa)
AB675_2758COP9 signalosome complex subunit 1. (496 aa)
AB675_2305DNA-directed RNA polymerase II subunit rpb7. (167 aa)
AB675_4765Transcription elongation factor S-II. (307 aa)
AB675_9928DNA-directed RNA polymerase II subunit RPB11. (167 aa)
AB675_4211DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
AB675_10998RNA polymerase II transcription factor B subunit 4. (445 aa)
AB675_4800Ubiquitin carboxyl-terminal hydrolase. (790 aa)
AB675_10782Putative RNA polymerase II transcription factor B subunit 1. (452 aa)
AB675_3930Switch 2. (1068 aa)
AB675_987Uncharacterized protein. (237 aa)
AB675_4719DNA damage-binding protein 1. (1181 aa)
AB675_3478Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1383 aa)
AB675_2304Uncharacterized protein. (519 aa)
AB675_11272Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (605 aa)
AB675_280RNA polymerase II transcription factor B subunit 3. (270 aa)
AB675_476Serine/threonine-protein kinase KIN28; Belongs to the protein kinase superfamily. (415 aa)
AB675_415DNA excision repair protein ckn1. (342 aa)
AB675_10564Peptidyl-prolyl cis-trans isomerase E. (151 aa)
AB675_7963COP9 signalosome complex subunit 3. (493 aa)
AB675_2061DNA-directed RNA polymerases I, II, and III subunit RPABC5. (79 aa)
AB675_2044Uncharacterized protein. (543 aa)
AB675_1574DNA-directed RNA polymerases I, II, and III subunit RPABC1. (237 aa)
AB675_5943BZIP domain-containing protein. (260 aa)
AB675_10043Replication factor C subunit 3. (405 aa)
AB675_3486DNA polymerase kappa. (669 aa)
AB675_8819Ubiquitin-40S ribosomal protein S27a. (158 aa)
AB675_4082Protein zds1. (941 aa)
AB675_10930Putative transcription factor C16C4.22. (191 aa)
AB675_11665DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family. (724 aa)
AB675_2970DNA repair protein rad14. (342 aa)
AB675_4338DNA repair protein rhp26. (1207 aa)
AB675_1327COP9 signalosome complex subunit 5. (363 aa)
AB675_1141Pre-mRNA-splicing factor syf1. (828 aa)
AB675_4529Pre-mRNA-splicing factor isy1. (251 aa)
AB675_3957DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1431 aa)
AB675_11966Uncharacterized protein. (136 aa)
AB675_4519Telomere length regulation protein elg1. (1058 aa)
AB675_9517Uncharacterized protein. (949 aa)
AB675_7482Peptidyl-prolyl cis-trans isomerase D. (369 aa)
AB675_9679Replication factor C subunit 4. (354 aa)
AB675_2030COP9 signalosome complex subunit 7. (297 aa)
AB675_9074Cyclin CCL1; Belongs to the cyclin family. (401 aa)
AB675_2361DNA-directed RNA polymerases I, II, and III subunit RPABC2. (154 aa)
AB675_8652COP9 signalosome complex subunit 2. (496 aa)
AB675_1915Replication factor C subunit 1. (363 aa)
AB675_886DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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