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AB675_7426 AB675_7426 AB675_10221 AB675_10221 AB675_9446 AB675_9446 AB675_4067 AB675_4067 AB675_3821 AB675_3821 AB675_7189 AB675_7189 AB675_11682 AB675_11682 AB675_4746 AB675_4746 AB675_10418 AB675_10418 AB675_3667 AB675_3667 AB675_11789 AB675_11789 AB675_1469 AB675_1469 AB675_3912 AB675_3912 AB675_3931 AB675_3931 AB675_12142 AB675_12142 AB675_4518 AB675_4518 AB675_7605 AB675_7605 AB675_10674 AB675_10674 AB675_10619 AB675_10619 AB675_10679 AB675_10679 AB675_9170 AB675_9170 AB675_9233 AB675_9233 RPS1 RPS1 AB675_9562 AB675_9562 AB675_1745 AB675_1745 RPS0 RPS0 AB675_6716 AB675_6716 AB675_6264 AB675_6264 AB675_6313 AB675_6313 AB675_6383 AB675_6383 AB675_8802 AB675_8802 AB675_8786 AB675_8786 AB675_2790 AB675_2790 AB675_689 AB675_689 AB675_627 AB675_627 AB675_8978 AB675_8978 AB675_1705 AB675_1705 AB675_8961 AB675_8961 AB675_10231 AB675_10231 AB675_151 AB675_151 AB675_3820 AB675_3820 AB675_11617 AB675_11617 AB675_9447 AB675_9447 AB675_1703 AB675_1703 AB675_3474 AB675_3474 AB675_3492 AB675_3492 AB675_4792 AB675_4792 AB675_7761 AB675_7761 AB675_11880 AB675_11880 AB675_8959 AB675_8959 AB675_7979 AB675_7979 AB675_4340 AB675_4340 AB675_9114 AB675_9114 AB675_12064 AB675_12064 SPB1 SPB1 AB675_5595 AB675_5595 AB675_9671 AB675_9671 AB675_9552 AB675_9552 AB675_3199 AB675_3199 AB675_2218 AB675_2218 AB675_6982 AB675_6982 AB675_11995 AB675_11995 AB675_11325 AB675_11325 AB675_6434 AB675_6434 AB675_4229 AB675_4229 AB675_5951 AB675_5951 AB675_10590 AB675_10590 AB675_8127 AB675_8127 AB675_11609 AB675_11609 AB675_11483 AB675_11483 YTM1 YTM1 AB675_9872 AB675_9872 AB675_2070 AB675_2070 AB675_7127 AB675_7127 AB675_6738 AB675_6738 AB675_6430 AB675_6430 AB675_6656 AB675_6656 AB675_6147 AB675_6147 AB675_6493 AB675_6493 AB675_8695 AB675_8695 AB675_797 AB675_797 AB675_385 AB675_385 AB675_2720 AB675_2720 AB675_9923 AB675_9923 AB675_566 AB675_566 AB675_4454 AB675_4454 AB675_10104 AB675_10104 AB675_11875 AB675_11875 AB675_6001 AB675_6001 AB675_7977 AB675_7977 AB675_4520 AB675_4520 AB675_3315 AB675_3315 AB675_2066 AB675_2066 AB675_6288 AB675_6288 AB675_5435 AB675_5435 AB675_8791 AB675_8791 AB675_6213 AB675_6213 AB675_8280 AB675_8280 AB675_732 AB675_732 AB675_569 AB675_569 AB675_3587 AB675_3587 AB675_3225 AB675_3225 AB675_6088 AB675_6088 AB675_4664 AB675_4664 AB675_8973 AB675_8973 AB675_7642 AB675_7642 AB675_7906 AB675_7906 ERB1 ERB1 AB675_9240 AB675_9240 AB675_9730 AB675_9730 AB675_2101 AB675_2101 AB675_6983 AB675_6983 AB675_8053 AB675_8053 AB675_7772 AB675_7772 AB675_8581 AB675_8581 AB675_6269 AB675_6269 NOP7 NOP7 AB675_5652 AB675_5652 AB675_500 AB675_500 AB675_1880 AB675_1880 AB675_496 AB675_496 AB675_6636 AB675_6636 AB675_599 AB675_599
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_7426ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (407 aa)
AB675_10221Protein sof1. (398 aa)
AB675_9446Bms1-type G domain-containing protein. (761 aa)
AB675_4067Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (560 aa)
AB675_382160S ribosomal protein L18-B. (189 aa)
AB675_718960S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
AB675_1168240S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (195 aa)
AB675_4746Putative nucleolar complex protein 14. (891 aa)
AB675_10418Sas10 domain-containing protein. (605 aa)
AB675_3667Ribosomal RNA-processing protein 7. (299 aa)
AB675_1178940S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (253 aa)
AB675_146940S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (1383 aa)
AB675_391260S ribosomal protein L34-B. (94 aa)
AB675_3931Exosome complex component SKI6. (260 aa)
AB675_12142rRNA-processing protein EBP2. (419 aa)
AB675_4518rRNA biogenesis protein rrp5. (1771 aa)
AB675_7605Uncharacterized protein. (477 aa)
AB675_10674Uncharacterized protein. (499 aa)
AB675_1061940S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (255 aa)
AB675_10679U3 small nucleolar RNA-associated protein 5. (862 aa)
AB675_9170Pre-rRNA-processing protein rix1. (770 aa)
AB675_9233Pre-rRNA-processing protein ipi1. (333 aa)
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (259 aa)
AB675_9562Putative RNA 3'-terminal phosphate cyclase-like protein. (406 aa)
AB675_1745U3 small nucleolar RNA-associated protein 15. (533 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (289 aa)
AB675_6716Exosome complex component RRP46. (238 aa)
AB675_6264Nuclear nucleic acid-binding protein C1D. (267 aa)
AB675_6313rRNA 2'-O-methyltransferase fibrillarin. (254 aa)
AB675_6383Nucleolar protein 56. (528 aa)
AB675_8802Uncharacterized protein. (568 aa)
AB675_8786U3 small nucleolar RNA-associated protein 6. (383 aa)
AB675_2790Uncharacterized protein. (220 aa)
AB675_689Pre-rRNA-processing protein PNO1. (269 aa)
AB675_627U3 small nucleolar RNA-associated protein 4. (904 aa)
AB675_8978RNA 3'-terminal phosphate cyclase. (453 aa)
AB675_1705Uncharacterized protein. (430 aa)
AB675_896140S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (129 aa)
AB675_10231KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (336 aa)
AB675_151rRNA biogenesis protein rrp36. (320 aa)
AB675_3820Exosome complex component rrp4. (342 aa)
AB675_1161737S ribosomal protein NAM9, mitochondrial. (407 aa)
AB675_9447Putative U3 small nucleolar RNA-associated protein 7. (567 aa)
AB675_1703Uncharacterized protein. (271 aa)
AB675_347440S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
AB675_349240S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (125 aa)
AB675_4792U3 small nucleolar ribonucleoprotein imp3. (188 aa)
AB675_77615'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1042 aa)
AB675_11880Casein kinase-like protein; Belongs to the protein kinase superfamily. (323 aa)
AB675_8959Uncharacterized protein. (460 aa)
AB675_797940S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
AB675_434040S ribosomal protein S19. (154 aa)
AB675_9114RNase_PH domain-containing protein. (393 aa)
AB675_12064Serine/threonine-protein kinase rio2. (429 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (827 aa)
AB675_559520S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (436 aa)
AB675_9671Protein LTV1. (483 aa)
AB675_955237S ribosomal protein S22, mitochondrial. (1052 aa)
AB675_3199Uncharacterized protein. (363 aa)
AB675_221840S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
AB675_698240S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (202 aa)
AB675_11995Exosome complex component MTR3. (317 aa)
AB675_11325Putative U3 small nucleolar RNA-associated protein 18. (606 aa)
AB675_6434Tethering factor for nuclear proteasome sts1; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (453 aa)
AB675_4229Exosome complex component CSL4. (203 aa)
AB675_595140S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
AB675_10590RNase_PH domain-containing protein. (423 aa)
AB675_812740S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (135 aa)
AB675_11609U3 small nucleolar RNA-associated protein 20. (2527 aa)
AB675_11483Exosome complex component rrp45. (297 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (462 aa)
AB675_9872Putative 60S ribosomal protein L28e. (150 aa)
AB675_2070ATP-dependent RNA helicase ROK1. (622 aa)
AB675_712740S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
AB675_6738Ribosome biogenesis protein bms1. (1165 aa)
AB675_6430ATP-dependent RNA helicase mtr4. (1078 aa)
AB675_6656CBF domain-containing protein. (271 aa)
AB675_614740S ribosomal protein S17. (149 aa)
AB675_6493U3 small nucleolar RNA-associated-like protein. (1025 aa)
AB675_8695U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (717 aa)
AB675_797Uncharacterized protein. (324 aa)
AB675_385Uncharacterized protein. (272 aa)
AB675_2720Putative WD repeat-containing protein. (944 aa)
AB675_9923Williams-Beuren syndrome chromosomal region 27 protein. (247 aa)
AB675_56640S ribosomal protein S28. (68 aa)
AB675_4454Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
AB675_10104U3 small nucleolar ribonucleoprotein IMP4. (293 aa)
AB675_11875Pre-rRNA-processing protein crb3/ipi3. (533 aa)
AB675_600140S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (122 aa)
AB675_797740S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
AB675_4520RNA exonuclease 4. (391 aa)
AB675_331540S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (251 aa)
AB675_2066U3 small nucleolar RNA-associated protein 17. (1078 aa)
AB675_628840S ribosomal protein S27. (328 aa)
AB675_5435Periodic tryptophan-like protein. (902 aa)
AB675_8791Polynucleotide 5'-hydroxyl-kinase grc3. (592 aa)
AB675_6213Exosome complex component RRP40. (287 aa)
AB675_8280Uncharacterized protein. (373 aa)
AB675_732Uncharacterized protein. (392 aa)
AB675_569rRNA-processing protein FCF1. (194 aa)
AB675_358760S ribosomal protein L43. (92 aa)
AB675_3225U3 small nucleolar RNA-associated protein 22. (1086 aa)
AB675_608860S ribosomal protein L2. (254 aa)
AB675_4664U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (267 aa)
AB675_8973Ribosomal RNA small subunit methyltransferase NEP1. (256 aa)
AB675_7642Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
AB675_790640S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (215 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1342 aa)
AB675_9240U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (656 aa)
AB675_9730Putative ATP-dependent RNA helicase DHR1. (1243 aa)
AB675_2101Nucleolar protein 58. (619 aa)
AB675_698340S ribosomal protein S10-B. (176 aa)
AB675_8053Exosome complex exonuclease RRP6. (810 aa)
AB675_7772ATP-dependent RNA helicase dbp8; Belongs to the DEAD box helicase family. (530 aa)
AB675_858140S ribosomal protein S20. (117 aa)
AB675_6269U3 small nucleolar RNA-associated protein 10. (1788 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (705 aa)
AB675_5652Putative RNA-binding protein. (801 aa)
AB675_500Putative U3 small nucleolar RNA-associated protein 13. (920 aa)
AB675_1880Uncharacterized protein. (493 aa)
AB675_496Uncharacterized protein. (572 aa)
AB675_663640S ribosomal protein S4. (385 aa)
AB675_599Ribosomal RNA-processing protein 17. (235 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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