STRINGSTRING
AB675_2852 AB675_2852 AB675_5999 AB675_5999 AB675_4211 AB675_4211 AB675_4965 AB675_4965 AB675_3950 AB675_3950 AB675_2061 AB675_2061 AB675_8603 AB675_8603 AB675_1574 AB675_1574 AB675_4103 AB675_4103 AB675_3787 AB675_3787 AB675_8332 AB675_8332 AB675_2361 AB675_2361
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_2852DNA-directed RNA polymerases I and III subunit RPAC1. (356 aa)
AB675_5999Uncharacterized protein. (471 aa)
AB675_4211DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
AB675_4965DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1190 aa)
AB675_3950RPA43_OB domain-containing protein. (478 aa)
AB675_2061DNA-directed RNA polymerases I, II, and III subunit RPABC5. (79 aa)
AB675_8603HMG box-containing protein C19G7.04. (785 aa)
AB675_1574DNA-directed RNA polymerases I, II, and III subunit RPABC1. (237 aa)
AB675_4103RNA polymerase I-specific transcription initiation factor rrn3. (677 aa)
AB675_3787DNA-binding protein reb1. (1215 aa)
AB675_8332Chromatin remodeling factor mit1. (1573 aa)
AB675_2361DNA-directed RNA polymerases I, II, and III subunit RPABC2. (154 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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