STRINGSTRING
AB675_2361 AB675_2361 AB675_4155 AB675_4155 AB675_4845 AB675_4845 AB675_10120 AB675_10120 AB675_11664 AB675_11664 AB675_11101 AB675_11101 AB675_8921 AB675_8921 AB675_8947 AB675_8947 AB675_3956 AB675_3956 AB675_1151 AB675_1151 AB675_4198 AB675_4198 AB675_5238 AB675_5238 AB675_7946 AB675_7946 AB675_7073 AB675_7073 AB675_2305 AB675_2305 AB675_9928 AB675_9928 AB675_4156 AB675_4156 AB675_4211 AB675_4211 cprA cprA AB675_10683 AB675_10683 AB675_4503 AB675_4503 AB675_2304 AB675_2304 AB675_9103 AB675_9103 AB675_9411 AB675_9411 AB675_2061 AB675_2061 AB675_2028 AB675_2028 AB675_9820 AB675_9820 AB675_6258 AB675_6258 AB675_534 AB675_534 AB675_2933 AB675_2933 AB675_1574 AB675_1574 AB675_2969 AB675_2969 AB675_7782 AB675_7782 AB675_7842 AB675_7842 AB675_2688 AB675_2688 AB675_11957 AB675_11957 AB675_4933 AB675_4933 AB675_11665 AB675_11665 AB675_8941 AB675_8941 AB675_6628 AB675_6628 AB675_5020 AB675_5020 AB675_886 AB675_886 AB675_1152 AB675_1152 AB675_3957 AB675_3957 AB675_9235 AB675_9235
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_2361DNA-directed RNA polymerases I, II, and III subunit RPABC2. (154 aa)
AB675_4155Protein kinase C-like protein. (578 aa)
AB675_4845Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (667 aa)
AB675_10120Histone H2B; Belongs to the histone H2B family. (170 aa)
AB675_11664DNA-directed RNA polymerase II subunit RPB2. (445 aa)
AB675_11101TATA-box-binding protein. (230 aa)
AB675_8921Lysine-specific histone demethylase 1A. (1062 aa)
AB675_8947RPOL4c domain-containing protein. (156 aa)
AB675_3956DNA-directed RNA polymerase II subunit RPB1. (304 aa)
AB675_1151Uncharacterized protein. (289 aa)
AB675_4198DNA-directed RNA polymerase II subunit RPB3. (199 aa)
AB675_5238BTB domain-containing protein. (876 aa)
AB675_7946ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (500 aa)
AB675_7073CTD kinase subunit beta; Belongs to the cyclin family. (729 aa)
AB675_2305DNA-directed RNA polymerase II subunit rpb7. (167 aa)
AB675_9928DNA-directed RNA polymerase II subunit RPB11. (167 aa)
AB675_4156Non-specific serine/threonine protein kinase. (577 aa)
AB675_4211DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
cprANADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (691 aa)
AB675_10683GATA type zinc finger protein asd-4. (256 aa)
AB675_4503Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (532 aa)
AB675_2304Uncharacterized protein. (519 aa)
AB675_9103Serine/threonine-protein kinase bur1. (623 aa)
AB675_9411Uncharacterized protein. (407 aa)
AB675_2061DNA-directed RNA polymerases I, II, and III subunit RPABC5. (79 aa)
AB675_2028Histone acetyltransferase GCN5. (456 aa)
AB675_9820Serine/threonine-protein phosphatase. (465 aa)
AB675_6258Fork-head transcriptional regulator 2. (762 aa)
AB675_534Uncharacterized protein. (404 aa)
AB675_2933Uncharacterized protein. (510 aa)
AB675_1574DNA-directed RNA polymerases I, II, and III subunit RPABC1. (237 aa)
AB675_2969Striatin Pro11. (836 aa)
AB675_7782Serine/threonine-protein kinase ksg1. (861 aa)
AB675_7842Transcription initiation factor IIA large subunit. (355 aa)
AB675_2688Heat shock-like protein. (400 aa)
AB675_11957Uncharacterized protein. (426 aa)
AB675_4933Transcription initiation factor IIF subunit beta. (383 aa)
AB675_11665DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family. (724 aa)
AB675_8941Uncharacterized protein. (389 aa)
AB675_6628Cyclin pch1; Belongs to the cyclin family. (522 aa)
AB675_5020Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (131 aa)
AB675_886DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
AB675_1152Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (114 aa)
AB675_3957DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1431 aa)
AB675_9235Nitrogen regulatory protein areA. (912 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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