119 items (Phialophora attae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AB675_4648	60S ribosomal protein L26-1. (138 aa)
	AB675_3423	Putative NADPH-dependent methylglyoxal GRP2. (334 aa)
	AB675_3256	Aldehyde 2. (342 aa)
	AB675_11493	Uncharacterized protein. (369 aa)
	AB675_10674	Uncharacterized protein. (499 aa)
	AB675_10616	Aldehyde 2. (340 aa)
	AB675_10619	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (255 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (259 aa)
	AB675_1770	60S ribosomal protein L9-B. (192 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (289 aa)
	AB675_6829	Aldehyde 2. (342 aa)
	AB675_6998	60S ribosomal protein L22. (125 aa)
	AB675_6902	60S ribosomal protein L5. (300 aa)
	AB675_8802	Uncharacterized protein. (568 aa)
	AB675_8336	Aldehyde 2. (345 aa)
	AB675_2770	60S ribosomal protein L33-B. (108 aa)
	AB675_3875	Epimerase domain-containing protein. (342 aa)
	AB675_4799	Ureidoglycolate lyase. (248 aa)
	AB675_8961	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (129 aa)
	AB675_2995	60S ribosomal protein L4-B. (373 aa)
	AB675_6055	DUF2439 domain-containing protein. (787 aa)
	AB675_4242	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (464 aa)
	AB675_11225	NmrA domain-containing protein. (367 aa)
	AB675_4899	Putative NADPH-dependent methylglyoxal GRP2. (223 aa)
	AB675_11617	37S ribosomal protein NAM9, mitochondrial. (407 aa)
	AB675_5204	Putative transcriptional regulatory protein. (879 aa)
	AB675_8962	60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
	AB675_3474	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	AB675_3492	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (125 aa)
	AB675_8959	Uncharacterized protein. (460 aa)
	AB675_7979	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	AB675_4340	40S ribosomal protein S19. (154 aa)
	AB675_10103	Helicase ATP-binding domain-containing protein. (1055 aa)
	AB675_9687	Uncharacterized protein. (347 aa)
	AB675_2218	40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	AB675_4514	Uncharacterized protein. (750 aa)
	AB675_6982	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (202 aa)
	AB675_12132	Eukaryotic translation initiation factor 4 gamma. (1482 aa)
	AB675_11336	Epimerase domain-containing protein. (310 aa)
	AB675_5759	Ribosomal protein L37; Binds to the 23S rRNA. (92 aa)
	AB675_5951	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
	AB675_4479	Uncharacterized protein. (453 aa)
	AB675_2679	zf-GRF domain-containing protein. (376 aa)
	AB675_2822	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (68 aa)
	AB675_8127	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (135 aa)
	AB675_503	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (106 aa)
	AB675_7863	Uncharacterized protein. (388 aa)
	AB675_8073	Uncharacterized protein. (415 aa)
	AB675_9360	60S ribosomal protein L25. (156 aa)
	AB675_9872	Putative 60S ribosomal protein L28e. (150 aa)
	AB675_1928	Putative transcriptional regulatory protein. (719 aa)
	AB675_2163	NmrA domain-containing protein. (877 aa)
	AB675_7127	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	AB675_1941	60S ribosomal protein L31-B. (111 aa)
	AB675_1891	Putative NADPH-dependent methylglyoxal GRP2. (342 aa)
	AB675_6856	60S ribosomal protein L14-B. (146 aa)
	AB675_6297	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (207 aa)
	AB675_6147	40S ribosomal protein S17. (149 aa)
	AB675_797	Uncharacterized protein. (324 aa)
	AB675_2314	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (203 aa)
	AB675_3854	Uncharacterized protein. (523 aa)
	AB675_2455	Uncharacterized protein. (325 aa)
	AB675_674	60S ribosomal protein L38-1; Belongs to the eukaryotic ribosomal protein eL38 family. (94 aa)
	AB675_276	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (175 aa)
	AB675_11687	Uncharacterized protein. (385 aa)
	AB675_566	40S ribosomal protein S28. (68 aa)
	AB675_1112	Uncharacterized oxido. (376 aa)
	AB675_4183	60S ribosomal protein L23-B; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	AB675_7365	NmrA domain-containing protein. (292 aa)
	AB675_4363	Nitrogen assimilation transcription factor nit-4. (693 aa)
	AB675_6001	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (122 aa)
	AB675_1069	NAD(P)-bd_dom domain-containing protein. (326 aa)
	AB675_1048	60S ribosomal protein L32. (131 aa)
	AB675_7977	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	AB675_5814	Cytochrome c oxidase assembly protein COX16, mitochondrial. (138 aa)
	AB675_4470	Uncharacterized protein. (786 aa)
	AB675_9039	60S ribosomal protein L24. (161 aa)
	AB675_3315	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (251 aa)
	AB675_7801	Uncharacterized oxido. (359 aa)
	AB675_2067	60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (185 aa)
	AB675_6288	40S ribosomal protein S27. (328 aa)
	AB675_8423	60S ribosomal protein L27a. (134 aa)
	AB675_732	Uncharacterized protein. (392 aa)
	AB675_1329	NmrA domain-containing protein. (313 aa)
	AB675_4346	60S ribosomal protein L7. (253 aa)
	AB675_11113	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	AB675_3587	60S ribosomal protein L43. (92 aa)
	AB675_10391	Uncharacterized protein. (336 aa)
	AB675_6088	60S ribosomal protein L2. (254 aa)
	AB675_11686	Kinetochore protein Sos7. (320 aa)
	AB675_11681	60S ribosomal protein L21-A. (158 aa)
	AB675_1485	ATP-dependent helicase upf1. (1078 aa)
	AB675_3259	Uncharacterized protein. (296 aa)
	AB675_9038	Uncharacterized protein. (440 aa)
	AB675_7906	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (215 aa)
	AB675_11524	Nuclear cap-binding protein subunit 2. (168 aa)
	AB675_6983	40S ribosomal protein S10-B. (176 aa)
	AB675_11283	60S ribosomal protein L10-A. (257 aa)
	AB675_8581	40S ribosomal protein S20. (117 aa)
	AB675_9864	Nuclear cap-binding protein subunit 1. (851 aa)
	AB675_1866	60S ribosomal protein L6-B. (202 aa)
	AB675_7135	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
	AB675_6148	Uncharacterized protein. (543 aa)
	AB675_9756	Uncharacterized oxido. (359 aa)
	AB675_975	Eukaryotic peptide chain release factor GTP-binding subunit. (641 aa)
	AB675_6636	40S ribosomal protein S4. (385 aa)
	AB675_885	54S ribosomal protein L38, mitochondrial; Belongs to the universal ribosomal protein uL14 family. (109 aa)
	AB675_1356	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (767 aa)
	AB675_3821	60S ribosomal protein L18-B. (189 aa)
	AB675_11682	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (195 aa)
	AB675_1608	Uncharacterized oxido. (330 aa)
	AB675_1662	Uncharacterized protein. (456 aa)
	AB675_11874	60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family. (202 aa)
	AB675_11789	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (253 aa)
	AB675_1469	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (1383 aa)
	AB675_3912	60S ribosomal protein L34-B. (94 aa)
	AB675_231	Uncharacterized oxido. (348 aa)
	AB675_163	Eukaryotic peptide chain release factor subunit 1. (549 aa)
	AB675_5882	60S acidic ribosomal protein P1. (127 aa)

Your Current Organism:

Phialophora attae

NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AB675_10103	AB675_10619	A0A0N1H634	A0A0N0NMX9	Helicase ATP-binding domain-containing protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.801
AB675_10103	AB675_10674	A0A0N1H634	A0A0N0NMR2	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.613
AB675_10103	AB675_11113	A0A0N1H634	A0A0N1NWM2	Helicase ATP-binding domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.605
AB675_10103	AB675_11524	A0A0N1H634	A0A0N1P0C6	Helicase ATP-binding domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.910
AB675_10103	AB675_11681	A0A0N1H634	A0A0N1NXL2	Helicase ATP-binding domain-containing protein.	60S ribosomal protein L21-A.	0.559
AB675_10103	AB675_11682	A0A0N1H634	A0A0N0NI76	Helicase ATP-binding domain-containing protein.	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.570
AB675_10103	AB675_11789	A0A0N1H634	A0A0N0NJM9	Helicase ATP-binding domain-containing protein.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.694
AB675_10103	AB675_11874	A0A0N1H634	A0A0N0NJD1	Helicase ATP-binding domain-containing protein.	60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.	0.560
AB675_10103	AB675_12132	A0A0N1H634	A0A0N1H8K4	Helicase ATP-binding domain-containing protein.	Eukaryotic translation initiation factor 4 gamma.	0.747
AB675_10103	AB675_1356	A0A0N1H634	A0A0N0NHZ4	Helicase ATP-binding domain-containing protein.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.995
AB675_10103	AB675_1469	A0A0N1H634	A0A0N0NJY2	Helicase ATP-binding domain-containing protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.643
AB675_10103	AB675_163	A0A0N1H634	A0A0N0NK51	Helicase ATP-binding domain-containing protein.	Eukaryotic peptide chain release factor subunit 1.	0.890
AB675_10103	AB675_1662	A0A0N1H634	A0A0N0NJ01	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.747
AB675_10103	AB675_1770	A0A0N1H634	A0A0N0NPN6	Helicase ATP-binding domain-containing protein.	60S ribosomal protein L9-B.	0.525
AB675_10103	AB675_1866	A0A0N1H634	A0A0N1P1Y5	Helicase ATP-binding domain-containing protein.	60S ribosomal protein L6-B.	0.623
AB675_10103	AB675_1928	A0A0N1H634	A0A0N1HDH5	Helicase ATP-binding domain-containing protein.	Putative transcriptional regulatory protein.	0.500
AB675_10103	AB675_1941	A0A0N1H634	A0A0N1HDX0	Helicase ATP-binding domain-containing protein.	60S ribosomal protein L31-B.	0.576
AB675_10103	AB675_2067	A0A0N1H634	A0A0N1HUB0	Helicase ATP-binding domain-containing protein.	60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.	0.559
AB675_10103	AB675_2218	A0A0N1H634	A0A0N1H7Z0	Helicase ATP-binding domain-containing protein.	40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family.	0.645
AB675_10103	AB675_2314	A0A0N1H634	A0A0N1HGZ8	Helicase ATP-binding domain-containing protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.575