STRINGSTRING
AB675_9998 AB675_9998 AB675_5997 AB675_5997 AB675_2304 AB675_2304 AB675_10681 AB675_10681 AB675_11495 AB675_11495 AB675_2061 AB675_2061 AB675_5633 AB675_5633 AB675_1574 AB675_1574 AB675_3285 AB675_3285 AB675_2307 AB675_2307 AB675_10930 AB675_10930 AB675_11665 AB675_11665 AB675_3867 AB675_3867 AB675_12047 AB675_12047 AB675_3957 AB675_3957 AB675_12043 AB675_12043 AB675_8263 AB675_8263 AB675_886 AB675_886 AB675_2361 AB675_2361 AB675_11664 AB675_11664 AB675_8947 AB675_8947 AB675_10063 AB675_10063 AB675_5999 AB675_5999 AB675_3956 AB675_3956 AB675_4198 AB675_4198 AB675_11361 AB675_11361 AB675_9737 AB675_9737 AB675_2154 AB675_2154 AB675_2852 AB675_2852 AB675_2305 AB675_2305 AB675_4765 AB675_4765 AB675_3076 AB675_3076 AB675_4193 AB675_4193 AB675_9928 AB675_9928 AB675_4211 AB675_4211 AB675_5774 AB675_5774 AB675_4965 AB675_4965 AB675_3950 AB675_3950
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_9998DNA-directed RNA polymerase III subunit rpc3. (550 aa)
AB675_5997Uncharacterized protein. (341 aa)
AB675_2304Uncharacterized protein. (519 aa)
AB675_10681Uncharacterized protein. (386 aa)
AB675_11495DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (276 aa)
AB675_2061DNA-directed RNA polymerases I, II, and III subunit RPABC5. (79 aa)
AB675_5633DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1199 aa)
AB675_1574DNA-directed RNA polymerases I, II, and III subunit RPABC1. (237 aa)
AB675_3285Diphthamide biosynthesis protein 4. (170 aa)
AB675_2307Diphthamide biosynthesis protein 3. (135 aa)
AB675_10930Putative transcription factor C16C4.22. (191 aa)
AB675_11665DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family. (724 aa)
AB675_3867DNA-directed RNA polymerases I and III subunit RPAC2. (134 aa)
AB675_12047Putative urease accessory ureD-like protein. (282 aa)
AB675_3957DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1431 aa)
AB675_12043Uncharacterized protein. (641 aa)
AB675_8263DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1570 aa)
AB675_886DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
AB675_2361DNA-directed RNA polymerases I, II, and III subunit RPABC2. (154 aa)
AB675_11664DNA-directed RNA polymerase II subunit RPB2. (445 aa)
AB675_8947RPOL4c domain-containing protein. (156 aa)
AB675_10063Uncharacterized protein. (543 aa)
AB675_5999Uncharacterized protein. (471 aa)
AB675_3956DNA-directed RNA polymerase II subunit RPB1. (304 aa)
AB675_4198DNA-directed RNA polymerase II subunit RPB3. (199 aa)
AB675_11361Transcription factor bye1. (928 aa)
AB675_9737E3 ubiquitin-protein ligase RNF14. (874 aa)
AB675_2154Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (634 aa)
AB675_2852DNA-directed RNA polymerases I and III subunit RPAC1. (356 aa)
AB675_2305DNA-directed RNA polymerase II subunit rpb7. (167 aa)
AB675_4765Transcription elongation factor S-II. (307 aa)
AB675_3076RBR-type E3 ubiquitin transferase. (763 aa)
AB675_4193Uncharacterized protein. (404 aa)
AB675_9928DNA-directed RNA polymerase II subunit RPB11. (167 aa)
AB675_4211DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
AB675_5774DNA-directed RNA polymerase III subunit RPC6. (440 aa)
AB675_4965DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1190 aa)
AB675_3950RPA43_OB domain-containing protein. (478 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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