(6 nodes) Amine transmembrane transporter activity, and ABC-type glycine betaine transport system, substrate-binding domain network (Mesorhizobium oceanicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APH71384.1	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
	APH71385.1	Choline ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	APH71386.1	Choline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
	APH74646.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (665 aa)
	APH72674.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
	APH74647.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)

Your Current Organism:

Mesorhizobium oceanicum

NCBI taxonomy Id: 1670800
Other names: KCTC 42783, M. oceanicum, MCCC 1K02305, Mesorhizobium oceanicum Fu et al. 2017, Mesorhizobium sp. B7, strain B7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APH71384.1	APH71385.1	BSQ44_08395	BSQ44_08400	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Choline ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APH71384.1	APH71386.1	BSQ44_08395	BSQ44_08405	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Choline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
APH71384.1	APH72674.1	BSQ44_08395	BSQ44_15885	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
APH71384.1	APH74646.1	BSQ44_08395	BSQ44_15880	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
APH71384.1	APH74647.1	BSQ44_08395	BSQ44_15890	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
APH71385.1	APH71384.1	BSQ44_08400	BSQ44_08395	Choline ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APH71385.1	APH71386.1	BSQ44_08400	BSQ44_08405	Choline ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Choline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APH71385.1	APH72674.1	BSQ44_08400	BSQ44_15885	Choline ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
APH71385.1	APH74646.1	BSQ44_08400	BSQ44_15880	Choline ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
APH71385.1	APH74647.1	BSQ44_08400	BSQ44_15890	Choline ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
APH71386.1	APH71384.1	BSQ44_08405	BSQ44_08395	Choline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
APH71386.1	APH71385.1	BSQ44_08405	BSQ44_08400	Choline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Choline ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APH71386.1	APH72674.1	BSQ44_08405	BSQ44_15885	Choline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
APH71386.1	APH74646.1	BSQ44_08405	BSQ44_15880	Choline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
APH71386.1	APH74647.1	BSQ44_08405	BSQ44_15890	Choline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
APH72674.1	APH71384.1	BSQ44_15885	BSQ44_08395	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
APH72674.1	APH71385.1	BSQ44_15885	BSQ44_08400	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Choline ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
APH72674.1	APH71386.1	BSQ44_15885	BSQ44_08405	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Choline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
APH72674.1	APH74646.1	BSQ44_15885	BSQ44_15880	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
APH72674.1	APH74647.1	BSQ44_15885	BSQ44_15890	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997