(7 nodes) Mixed, incl. Solute binding protein, TakP-like, and Sugar transport network (Mesorhizobium oceanicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APH73823.1	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
	APH73824.1	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (629 aa)
	APH73825.1	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (368 aa)
	APH73826.1	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (368 aa)
	APH74214.1	C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
	APH74215.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
	APH74216.1	C4-dicarboxylate ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (359 aa)

Your Current Organism:

Mesorhizobium oceanicum

NCBI taxonomy Id: 1670800
Other names: KCTC 42783, M. oceanicum, MCCC 1K02305, Mesorhizobium oceanicum Fu et al. 2017, Mesorhizobium sp. B7, strain B7

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APH73823.1	APH73824.1	BSQ44_22395	BSQ44_22400	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
APH73823.1	APH73825.1	BSQ44_22395	BSQ44_22405	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	0.789
APH73823.1	APH73826.1	BSQ44_22395	BSQ44_22410	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	0.789
APH73823.1	APH74214.1	BSQ44_22395	BSQ44_24735	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
APH73823.1	APH74216.1	BSQ44_22395	BSQ44_24745	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	C4-dicarboxylate ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	0.783
APH73824.1	APH73823.1	BSQ44_22400	BSQ44_22395	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
APH73824.1	APH73825.1	BSQ44_22400	BSQ44_22405	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	0.795
APH73824.1	APH73826.1	BSQ44_22400	BSQ44_22410	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	0.795
APH73824.1	APH74215.1	BSQ44_22400	BSQ44_24740	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
APH73824.1	APH74216.1	BSQ44_22400	BSQ44_24745	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	C4-dicarboxylate ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	0.791
APH73825.1	APH73823.1	BSQ44_22405	BSQ44_22395	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.789
APH73825.1	APH73824.1	BSQ44_22405	BSQ44_22400	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
APH73825.1	APH73826.1	BSQ44_22405	BSQ44_22410	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	0.614
APH73825.1	APH74214.1	BSQ44_22405	BSQ44_24735	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
APH73825.1	APH74215.1	BSQ44_22405	BSQ44_24740	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
APH73825.1	APH74216.1	BSQ44_22405	BSQ44_24745	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	C4-dicarboxylate ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	0.541
APH73826.1	APH73823.1	BSQ44_22410	BSQ44_22395	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.789
APH73826.1	APH73824.1	BSQ44_22410	BSQ44_22400	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
APH73826.1	APH73825.1	BSQ44_22410	BSQ44_22405	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	0.614
APH73826.1	APH74214.1	BSQ44_22410	BSQ44_24735	ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.	C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778