Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APH70509.1 | APH72010.1 | BSQ44_03250 | BSQ44_12025 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-aminobenzoate-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.479 |
| APH70509.1 | APH72993.1 | BSQ44_03250 | BSQ44_17680 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetoacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
| APH70509.1 | APH73294.1 | BSQ44_03250 | BSQ44_19395 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetoacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
| APH70509.1 | APH73924.1 | BSQ44_03250 | BSQ44_23020 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.532 |
| APH70509.1 | acsA | BSQ44_03250 | BSQ44_23935 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.485 |
| APH70509.1 | prpE | BSQ44_03250 | BSQ44_01185 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.485 |
| APH70694.1 | APH73189.1 | BSQ44_04295 | BSQ44_18810 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.695 |
| APH70694.1 | APH73527.1 | BSQ44_04295 | BSQ44_20750 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | long-chain-fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.654 |
| APH70694.1 | APH73787.1 | BSQ44_04295 | BSQ44_22195 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.619 |
| APH70694.1 | APH73817.1 | BSQ44_04295 | BSQ44_22365 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.671 |
| APH70761.1 | APH72010.1 | BSQ44_04710 | BSQ44_12025 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-aminobenzoate-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.454 |
| APH70761.1 | APH72993.1 | BSQ44_04710 | BSQ44_17680 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetoacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
| APH70761.1 | APH73294.1 | BSQ44_04710 | BSQ44_19395 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetoacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
| APH70761.1 | APH73924.1 | BSQ44_04710 | BSQ44_23020 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.521 |
| APH70761.1 | acsA | BSQ44_04710 | BSQ44_23935 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.444 |
| APH70761.1 | prpE | BSQ44_04710 | BSQ44_01185 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
| APH70902.1 | APH72010.1 | BSQ44_05550 | BSQ44_12025 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-aminobenzoate-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.466 |
| APH70902.1 | APH72993.1 | BSQ44_05550 | BSQ44_17680 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetoacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.489 |
| APH70902.1 | APH73294.1 | BSQ44_05550 | BSQ44_19395 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetoacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
| APH70902.1 | APH73924.1 | BSQ44_05550 | BSQ44_23020 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
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