STRINGSTRING
mdh mdh APH70101.1 APH70101.1 APH70397.1 APH70397.1 APH70481.1 APH70481.1 glcB glcB APH70967.1 APH70967.1 APH71070.1 APH71070.1 APH71097.1 APH71097.1 purU purU APH71484.1 APH71484.1 APH71491.1 APH71491.1 APH71492.1 APH71492.1 APH71599.1 APH71599.1 APH71639.1 APH71639.1 APH71861.1 APH71861.1 APH71862.1 APH71862.1 APH71864.1 APH71864.1 APH71865.1 APH71865.1 APH71873.1 APH71873.1 APH71908.1 APH71908.1 APH72017.1 APH72017.1 gcvP gcvP gcvH gcvH APH72030.1 APH72030.1 APH72098.1 APH72098.1 APH72211.1 APH72211.1 APH72355.1 APH72355.1 APH72367.1 APH72367.1 APH72425.1 APH72425.1 APH72471.1 APH72471.1 APH72569.1 APH72569.1 glyA glyA APH73190.1 APH73190.1 APH73262.1 APH73262.1 APH73265.1 APH73265.1 APH74710.1 APH74710.1 APH73306.1 APH73306.1 APH73309.1 APH73309.1 APH73458.1 APH73458.1 APH73486.1 APH73486.1 APH73529.1 APH73529.1 APH73571.1 APH73571.1 APH73583.1 APH73583.1 APH73666.1 APH73666.1 APH73697.1 APH73697.1 APH73732.1 APH73732.1 APH74761.1 APH74761.1 APH73780.1 APH73780.1 APH73836.1 APH73836.1 APH73837.1 APH73837.1 APH73924.1 APH73924.1 APH74000.1 APH74000.1 APH74792.1 APH74792.1 APH74030.1 APH74030.1 acsA acsA APH74204.1 APH74204.1 APH74275.1 APH74275.1 APH74276.1 APH74276.1 APH74297.1 APH74297.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (321 aa)
APH70101.1Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
APH70397.1Glyoxylate/hydroxypyruvate reductase A; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
APH70481.1D-glycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (334 aa)
glcBMalate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (728 aa)
APH70967.1Septum site-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
APH71070.1citryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
APH71097.1N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (287 aa)
APH71484.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (388 aa)
APH71491.1methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (706 aa)
APH71492.1methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
APH71599.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
APH71639.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (755 aa)
APH71861.1Formate dehydrogenase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
APH71862.1Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
APH71864.1Formate dehydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (961 aa)
APH71865.1Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)
APH71873.1Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
APH71908.1Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
APH72017.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (450 aa)
gcvPIS630 family transposase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (934 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (122 aa)
APH72030.1Glycine cleavage system protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
APH72098.1methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
APH72211.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
APH72355.1acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
APH72367.1methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
APH72425.1Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (229 aa)
APH72471.1Citrate (Si)-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. (429 aa)
APH72569.1Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (437 aa)
APH73190.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
APH73262.12-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
APH73265.1FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
APH74710.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (452 aa)
APH73306.1Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
APH73309.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (477 aa)
APH73458.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
APH73486.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
APH73529.1HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
APH73571.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (484 aa)
APH73583.1Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
APH73666.1Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide. (704 aa)
APH73697.1Keto-deoxy-phosphogluconate aldolase; Catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
APH73732.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
APH74761.1Phosphoglycolate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
APH73780.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (456 aa)
APH73836.1Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
APH73837.1Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family. (263 aa)
APH73924.1AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
APH74000.1Citrate synthase/methylcitrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. (362 aa)
APH74792.1Citrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
APH74030.1Glycine cleavage system protein T; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (410 aa)
acsAacetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (651 aa)
APH74204.1Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (901 aa)
APH74275.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
APH74276.1beta-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
APH74297.1Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (897 aa)
Your Current Organism:
Mesorhizobium oceanicum
NCBI taxonomy Id: 1670800
Other names: KCTC 42783, M. oceanicum, MCCC 1K02305, Mesorhizobium oceanicum Fu et al. 2017, Mesorhizobium sp. B7, strain B7
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