STRINGSTRING
APH70206.1 APH70206.1 APH70239.1 APH70239.1 APH70253.1 APH70253.1 APH70339.1 APH70339.1 APH70404.1 APH70404.1 dnaA dnaA glnD glnD APH70510.1 APH70510.1 APH70511.1 APH70511.1 APH70565.1 APH70565.1 APH70671.1 APH70671.1 APH70673.1 APH70673.1 APH70854.1 APH70854.1 APH70855.1 APH70855.1 APH70937.1 APH70937.1 APH70981.1 APH70981.1 APH71044.1 APH71044.1 APH71075.1 APH71075.1 APH74453.1 APH74453.1 APH71322.1 APH71322.1 APH71363.1 APH71363.1 APH71364.1 APH71364.1 APH71365.1 APH71365.1 APH71382.1 APH71382.1 APH71484.1 APH71484.1 APH74498.1 APH74498.1 APH71535.1 APH71535.1 APH71538.1 APH71538.1 APH71580.1 APH71580.1 APH71631.1 APH71631.1 APH71646.1 APH71646.1 APH71658.1 APH71658.1 APH71835.1 APH71835.1 ctaA ctaA APH71868.1 APH71868.1 APH71902.1 APH71902.1 APH71908.1 APH71908.1 APH71909.1 APH71909.1 glsA glsA APH72017.1 APH72017.1 APH72039.1 APH72039.1 APH72043.1 APH72043.1 APH72067.1 APH72067.1 APH72068.1 APH72068.1 BSQ44_12770 BSQ44_12770 APH72211.1 APH72211.1 APH72250.1 APH72250.1 APH72259.1 APH72259.1 APH72260.1 APH72260.1 APH74590.1 APH74590.1 APH74593.1 APH74593.1 APH72272.1 APH72272.1 APH72552.1 APH72552.1 APH72553.1 APH72553.1 ntrC ntrC APH72555.1 APH72555.1 APH72897.1 APH72897.1 APH72898.1 APH72898.1 APH72899.1 APH72899.1 APH72900.1 APH72900.1 APH73006.1 APH73006.1 APH73060.1 APH73060.1 APH74684.1 APH74684.1 APH73061.1 APH73061.1 APH73102.1 APH73102.1 APH74689.1 APH74689.1 APH73162.1 APH73162.1 APH73163.1 APH73163.1 APH73164.1 APH73164.1 APH73190.1 APH73190.1 APH73200.1 APH73200.1 APH74710.1 APH74710.1 APH73309.1 APH73309.1 APH73378.1 APH73378.1 APH74726.1 APH74726.1 APH73458.1 APH73458.1 APH73483.1 APH73483.1 APH73492.1 APH73492.1 APH73493.1 APH73493.1 APH73533.1 APH73533.1 APH73539.1 APH73539.1 APH73557.1 APH73557.1 cheB cheB APH73559.1 APH73559.1 APH73560.1 APH73560.1 APH73561.1 APH73561.1 APH73562.1 APH73562.1 APH73564.1 APH73564.1 APH73565.1 APH73565.1 APH73571.1 APH73571.1 APH73618.1 APH73618.1 APH73633.1 APH73633.1 APH73634.1 APH73634.1 APH73656.1 APH73656.1 APH73712.1 APH73712.1 APH73729.1 APH73729.1 APH73732.1 APH73732.1 APH73780.1 APH73780.1 APH73818.1 APH73818.1 APH73893.1 APH73893.1 APH74005.1 APH74005.1 APH74020.1 APH74020.1 fixJ fixJ APH74023.1 APH74023.1 APH74054.1 APH74054.1 APH74058.1 APH74058.1 APH74200.1 APH74200.1 APH74824.1 APH74824.1 APH74275.1 APH74275.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APH70206.1Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)
APH70239.1Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)
APH70253.1CoA ester lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (293 aa)
APH70339.1RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (505 aa)
APH70404.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
dnaAChromosomal replication initiation protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (497 aa)
glnD[protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism. (931 aa)
APH70510.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
APH70511.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
APH70565.1Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (643 aa)
APH70671.1C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
APH70673.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
APH70854.1DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
APH70855.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)
APH70937.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (614 aa)
APH70981.1C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
APH71044.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (622 aa)
APH71075.1C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
APH74453.1Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
APH71322.1C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
APH71363.1DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
APH71364.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)
APH71365.1Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
APH71382.1Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
APH71484.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (388 aa)
APH74498.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (575 aa)
APH71535.1Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. (506 aa)
APH71538.1PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (774 aa)
APH71580.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
APH71631.1CoA ester lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (305 aa)
APH71646.1C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
APH71658.1C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
APH71835.1Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)
ctaAHeme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. (363 aa)
APH71868.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (737 aa)
APH71902.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
APH71908.1Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
APH71909.1Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
glsAGlutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family. (309 aa)
APH72017.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (450 aa)
APH72039.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (633 aa)
APH72043.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
APH72067.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
APH72068.1PleD family two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
BSQ44_12770Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (860 aa)
APH72211.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
APH72250.1CoA ester lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (288 aa)
APH72259.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)
APH72260.1Cytochrome ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
APH74590.1Cytochrome d ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
APH74593.1Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. (494 aa)
APH72272.1GGDEF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
APH72552.1Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
APH72553.1PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (757 aa)
ntrCNitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (485 aa)
APH72555.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
APH72897.1Cytochrome-c oxidase, cbb3-type subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (546 aa)
APH72898.1Cytochrome-c oxidase, cbb3-type subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
APH72899.1Cbb3-type cytochrome C oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. (50 aa)
APH72900.1Cytochrome-c oxidase, cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (287 aa)
APH73006.1Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
APH73060.1C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
APH74684.1C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
APH73061.1C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa)
APH73102.1DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
APH74689.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
APH73162.1Cytochrome c1; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
APH73163.1Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (434 aa)
APH73164.1Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (187 aa)
APH73190.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
APH73200.1C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
APH74710.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (452 aa)
APH73309.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (477 aa)
APH73378.1C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
APH74726.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
APH73458.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
APH73483.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
APH73492.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
APH73493.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
APH73533.1Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
APH73539.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
APH73557.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
cheBChemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (355 aa)
APH73559.1Chemotaxis protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (293 aa)
APH73560.1Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
APH73561.1Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (738 aa)
APH73562.1Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
APH73564.1Globin-coupled sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (535 aa)
APH73565.1Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (328 aa)
APH73571.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (484 aa)
APH73618.1Flagellar motor stator protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
APH73633.1Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (309 aa)
APH73634.1Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (308 aa)
APH73656.1TRAP transporter small permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
APH73712.1Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)
APH73729.1Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
APH73732.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
APH73780.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (456 aa)
APH73818.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
APH73893.1DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
APH74005.1DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
APH74020.1PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)
fixJResponse regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
APH74023.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
APH74054.1Phosphate regulon transcriptional regulatory protein PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
APH74058.1Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
APH74200.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
APH74824.1Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (413 aa)
APH74275.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
Your Current Organism:
Mesorhizobium oceanicum
NCBI taxonomy Id: 1670800
Other names: KCTC 42783, M. oceanicum, MCCC 1K02305, Mesorhizobium oceanicum Fu et al. 2017, Mesorhizobium sp. B7, strain B7
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