Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KMT53070.1 | KMT53767.1 | ACR52_23160 | ACR52_20580 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.734 |
| KMT53070.1 | KMT55136.1 | ACR52_23160 | ACR52_11205 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0307 family. | 0.679 |
| KMT53070.1 | KMT55223.1 | ACR52_23160 | ACR52_11690 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.510 |
| KMT53070.1 | KMT55460.1 | ACR52_23160 | ACR52_12955 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.679 |
| KMT53070.1 | KMT56159.1 | ACR52_23160 | ACR52_07200 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.679 |
| KMT53070.1 | KMT56733.1 | ACR52_23160 | ACR52_03905 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.679 |
| KMT53070.1 | KMT56875.1 | ACR52_23160 | ACR52_04640 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.516 |
| KMT53070.1 | deaD | ACR52_23160 | ACR52_14395 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.679 |
| KMT53070.1 | engB | ACR52_23160 | ACR52_05665 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.915 |
| KMT53070.1 | obgE | ACR52_23160 | ACR52_08350 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.727 |
| KMT53070.1 | rhlB | ACR52_23160 | ACR52_10615 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily. | 0.679 |
| KMT53070.1 | rhlE | ACR52_23160 | ACR52_07350 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DEAD/DEAH box helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. | 0.679 |
| KMT53070.1 | rlmB | ACR52_23160 | ACR52_18580 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 23S rRNA methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. | 0.925 |
| KMT53070.1 | rnr | ACR52_23160 | ACR52_18585 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.680 |
| KMT53070.1 | rsfS | ACR52_23160 | ACR52_13195 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosome-associated protein IOJAP; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.941 |
| KMT53070.1 | truD | ACR52_23160 | ACR52_01885 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.921 |
| KMT53767.1 | KMT53070.1 | ACR52_20580 | ACR52_23160 | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.734 |
| KMT53767.1 | KMT55223.1 | ACR52_20580 | ACR52_11690 | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.734 |
| KMT53767.1 | KMT55460.1 | ACR52_20580 | ACR52_12955 | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.860 |
| KMT53767.1 | KMT56159.1 | ACR52_20580 | ACR52_07200 | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.859 |
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