6 items (Pseudomonas sp. KG01) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KMT56787.1	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (708 aa)
	polA	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (923 aa)
	KMT55329.1	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology. (946 aa)
	KMT54385.1	Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology. (1212 aa)
	sbcD	Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (413 aa)
	KMT53308.1	DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. (649 aa)

Your Current Organism:

Pseudomonas sp. KG01

NCBI taxonomy Id: 1674920
Other names: P. sp. KG01

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KMT53308.1	KMT54385.1	ACR52_22510	ACR52_16255	DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
KMT53308.1	KMT55329.1	ACR52_22510	ACR52_12245	DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
KMT53308.1	KMT56787.1	ACR52_22510	ACR52_04175	DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
KMT53308.1	polA	ACR52_22510	ACR52_05670	DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.778
KMT53308.1	sbcD	ACR52_22510	ACR52_16260	DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.	0.800
KMT54385.1	KMT53308.1	ACR52_16255	ACR52_22510	Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
KMT54385.1	KMT56787.1	ACR52_16255	ACR52_04175	Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
KMT54385.1	polA	ACR52_16255	ACR52_05670	Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.999
KMT54385.1	sbcD	ACR52_16255	ACR52_16260	Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.	0.999
KMT55329.1	KMT53308.1	ACR52_12245	ACR52_22510	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
KMT55329.1	KMT56787.1	ACR52_12245	ACR52_04175	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
KMT55329.1	polA	ACR52_12245	ACR52_05670	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.999
KMT55329.1	sbcD	ACR52_12245	ACR52_16260	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.	0.999
KMT56787.1	KMT53308.1	ACR52_04175	ACR52_22510	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
KMT56787.1	KMT54385.1	ACR52_04175	ACR52_16255	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
KMT56787.1	KMT55329.1	ACR52_04175	ACR52_12245	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
KMT56787.1	polA	ACR52_04175	ACR52_05670	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.981
KMT56787.1	sbcD	ACR52_04175	ACR52_16260	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.	0.980
polA	KMT53308.1	ACR52_05670	ACR52_22510	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
polA	KMT54385.1	ACR52_05670	ACR52_16255	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999