STRINGSTRING
KMT54727.1 KMT54727.1 recG recG KMT56338.1 KMT56338.1 KMT56942.1 KMT56942.1 KMT56690.1 KMT56690.1 KMT57635.1 KMT57635.1 KMT52779.1 KMT52779.1 KMT53545.1 KMT53545.1 KMT54473.1 KMT54473.1 KMT54472.1 KMT54472.1 KMT54411.1 KMT54411.1 KMT55386.1 KMT55386.1 KMT55253.1 KMT55253.1 KMT55251.1 KMT55251.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KMT54727.1Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
recGATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (691 aa)
KMT56338.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (747 aa)
KMT56942.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
KMT56690.1Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (112 aa)
KMT57635.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
KMT52779.1UV damage repair endonuclease UvdE; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
KMT53545.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
KMT54473.1Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
KMT54472.1Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
KMT54411.1Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
KMT55386.1Recombination and repair protein; May be involved in recombinational repair of damaged DNA. (557 aa)
KMT55253.1Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family. (478 aa)
KMT55251.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
Your Current Organism:
Pseudomonas sp. KG01
NCBI taxonomy Id: 1674920
Other names: P. sp. KG01
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