(7 nodes) Response to UV network (Pseudomonas sp. KG01)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KMT54472.1	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
	KMT52779.1	UV damage repair endonuclease UvdE; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
	recG	ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (691 aa)
	KMT55251.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
	KMT55253.1	Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family. (478 aa)
	KMT54411.1	Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
	KMT54473.1	Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)

Your Current Organism:

Pseudomonas sp. KG01

NCBI taxonomy Id: 1674920
Other names: P. sp. KG01

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KMT54472.1	KMT54473.1	ACR52_16705	ACR52_16715	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
KMT54473.1	KMT54472.1	ACR52_16715	ACR52_16705	Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
KMT55251.1	KMT55253.1	ACR52_11835	ACR52_11845	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.	0.981
KMT55253.1	KMT55251.1	ACR52_11845	ACR52_11835	Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981