STRINGSTRING
fabV fabV aroA aroA pyrD pyrD KMT56691.1 KMT56691.1 KMT56693.1 KMT56693.1 KMT56697.1 KMT56697.1 KMT56853.1 KMT56853.1 KMT56935.1 KMT56935.1 KMT56992.1 KMT56992.1 dusC dusC KMT56437.1 KMT56437.1 hemF hemF KMT56012.1 KMT56012.1 pqqC pqqC KMT56068.1 KMT56068.1 KMT56069.1 KMT56069.1 KMT56071.1 KMT56071.1 KMT56231.1 KMT56231.1 dusB dusB KMT55857.1 KMT55857.1 KMT55166.1 KMT55166.1 KMT55624.1 KMT55624.1 dapB dapB KMT55430.1 KMT55430.1 KMT55478.1 KMT55478.1 KMT54922.1 KMT54922.1 fadH fadH KMT54966.1 KMT54966.1 KMT54748.1 KMT54748.1 KMT54749.1 KMT54749.1 KMT54676.1 KMT54676.1 KMT54372.1 KMT54372.1 KMT54403.1 KMT54403.1 KMT54072.1 KMT54072.1 KMT54223.1 KMT54223.1 KMT54302.1 KMT54302.1 cysG cysG KMT53753.1 KMT53753.1 KMT53754.1 KMT53754.1 KMT53851.1 KMT53851.1 dusA dusA KMT53113.1 KMT53113.1 KMT53114.1 KMT53114.1 sdhA sdhA KMT53147.1 KMT53147.1 fadE fadE KMT53199.1 KMT53199.1 KMT52989.1 KMT52989.1 KMT52805.1 KMT52805.1 KMT52822.1 KMT52822.1 KMT52912.1 KMT52912.1 KMT52914.1 KMT52914.1 KMT52720.1 KMT52720.1 KMT52721.1 KMT52721.1 KMT52425.1 KMT52425.1 KMT52194.1 KMT52194.1 KMT52381.1 KMT52381.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fabVtrans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. (397 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (736 aa)
pyrDDihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (339 aa)
KMT56691.12-alkenal reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
KMT56693.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
KMT56697.1Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (460 aa)
KMT56853.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
KMT56935.1TenA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
KMT56992.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
dusCtRNA-dihydrouridine synthase C; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily. (322 aa)
KMT56437.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
hemFCoproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. (310 aa)
KMT56012.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
pqqCPyrroloquinoline quinone biosynthesis protein PqqC; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. (250 aa)
KMT56068.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (592 aa)
KMT56069.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (590 aa)
KMT56071.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (601 aa)
KMT56231.1Oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (400 aa)
dusBtRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily. (337 aa)
KMT55857.1cobalt-precorrin-6X reductase; CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
KMT55166.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
KMT55624.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (268 aa)
KMT55430.1ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
KMT55478.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa)
KMT54922.1Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
fadH2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (679 aa)
KMT54966.1isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
KMT54748.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
KMT54749.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
KMT54676.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
KMT54372.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (842 aa)
KMT54403.1Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
KMT54072.1Heme iron utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
KMT54223.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
KMT54302.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
cysGSirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. (464 aa)
KMT53753.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)
KMT53754.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
KMT53851.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
dusAtRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (339 aa)
KMT53113.1Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
KMT53114.1Succinate dehydrogenase; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (122 aa)
sdhAPart of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (590 aa)
KMT53147.1NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
fadEacyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (815 aa)
KMT53199.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
KMT52989.1Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
KMT52805.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
KMT52822.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
KMT52912.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
KMT52914.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
KMT52720.1Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (461 aa)
KMT52721.1Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
KMT52425.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
KMT52194.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
KMT52381.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (584 aa)
Your Current Organism:
Pseudomonas sp. KG01
NCBI taxonomy Id: 1674920
Other names: P. sp. KG01
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