STRINGSTRING
KMT57377.1 KMT57377.1 rpmI rpmI rplT rplT KMT57123.1 KMT57123.1 KMT57145.1 KMT57145.1 KMT57178.1 KMT57178.1 KMT57225.1 KMT57225.1 rpsB rpsB KMT57448.1 KMT57448.1 KMT57486.1 KMT57486.1 KMT57565.1 KMT57565.1 recO recO KMT57613.1 KMT57613.1 KMT57630.1 KMT57630.1 gyrA gyrA rpsA rpsA prpB prpB smc smc dnaX dnaX KMT56690.1 KMT56690.1 recR recR KMT56718.1 KMT56718.1 KMT56749.1 KMT56749.1 KMT56761.1 KMT56761.1 KMT56787.1 KMT56787.1 phhB phhB KMT56848.1 KMT56848.1 KMT56856.1 KMT56856.1 KMT56857.1 KMT56857.1 alc alc KMT56886.1 KMT56886.1 KMT56897.1 KMT56897.1 mtnD mtnD KMT56941.1 KMT56941.1 KMT56989.1 KMT56989.1 gyrB gyrB KMT56557.1 KMT56557.1 KMT56570.1 KMT56570.1 dnaG dnaG betI betI KMT56248.1 KMT56248.1 rplS rplS rimM rimM rpsP rpsP KMT56278.1 KMT56278.1 KMT56363.1 KMT56363.1 rpmA rpmA rplU rplU KMT56415.1 KMT56415.1 KMT55846.1 KMT55846.1 rpmE rpmE priA priA KMT55912.1 KMT55912.1 KMT55654.1 KMT55654.1 rpmB rpmB rpmG rpmG KMT55743.1 KMT55743.1 KMT55095.1 KMT55095.1 KMT55126.1 KMT55126.1 KMT55158.1 KMT55158.1 rpsI rpsI rplM rplM KMT55235.1 KMT55235.1 rpsT rpsT KMT55253.1 KMT55253.1 hemA hemA ispE ispE rplY rplY KMT55322.1 KMT55322.1 rpsO rpsO KMT55386.1 KMT55386.1 KMT55400.1 KMT55400.1 KMT55471.1 KMT55471.1 nadD nadD KMT55508.1 KMT55508.1 ubiX ubiX eutC eutC rplQ rplQ rpsD rpsD rpsK rpsK rpsM rpsM rplO rplO rpmD rpmD rpsE rpsE rplR rplR rplF rplF rpsH rpsH rpsN rpsN rplE rplE rplX rplX rplN rplN rpsQ rpsQ rpmC rpmC rplP rplP rpsC rpsC rplV rplV rpsS rpsS rplB rplB rplW rplW rplD rplD rplC rplC rpsJ rpsJ rpsG rpsG rpsL rpsL rplL rplL rplJ rplJ rplA rplA rplK rplK phnW phnW KMT54718.1 KMT54718.1 KMT54790.1 KMT54790.1 KMT54792.1 KMT54792.1 topA topA KMT54618.1 KMT54618.1 KMT54669.1 KMT54669.1 KMT54417.1 KMT54417.1 KMT54469.1 KMT54469.1 KMT54526.1 KMT54526.1 KMT53910.1 KMT53910.1 KMT54015.1 KMT54015.1 KMT54144.1 KMT54144.1 rplI rplI rpsR rpsR rpsF rpsF miaA miaA parC parC parE parE selO selO KMT54340.1 KMT54340.1 KMT53695.1 KMT53695.1 clpS clpS KMT53710.1 KMT53710.1 KMT53854.1 KMT53854.1 KMT53417.1 KMT53417.1 KMT53449.1 KMT53449.1 KMT53244.1 KMT53244.1 KMT53291.1 KMT53291.1 KMT53308.1 KMT53308.1 KMT53348.1 KMT53348.1 KMT53383.1 KMT53383.1 KMT53397.1 KMT53397.1 KMT53400.1 KMT53400.1 KMT53161.1 KMT53161.1 KMT52834.1 KMT52834.1 KMT52844.1 KMT52844.1 KMT52848.1 KMT52848.1 KMT52862.1 KMT52862.1 KMT52977.1 KMT52977.1 KMT52688.1 KMT52688.1 KMT52556.1 KMT52556.1 KMT52578.1 KMT52578.1 gfa gfa KMT52597.1 KMT52597.1 KMT52611.1 KMT52611.1 KMT52616.1 KMT52616.1 rpmF rpmF ihfB ihfB KMT52480.1 KMT52480.1 KMT52497.1 KMT52497.1 KMT52499.1 KMT52499.1 KMT52427.1 KMT52427.1 KMT52437.1 KMT52437.1 KMT52417.1 KMT52417.1 KMT52188.1 KMT52188.1 KMT52319.1 KMT52319.1 KMT52114.1 KMT52114.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KMT57377.1Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
rpmI50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family. (64 aa)
rplT50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (118 aa)
KMT57123.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
KMT57145.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
KMT57178.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
KMT57225.12-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
rpsB30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. (245 aa)
KMT57448.12-methylisocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
KMT57486.1DTW protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
KMT57565.150S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL31 family. (80 aa)
recODNA recombination protein RecO; Involved in DNA repair and RecF pathway recombination. (229 aa)
KMT57613.1DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
KMT57630.1Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)
gyrADNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (889 aa)
rpsA30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (564 aa)
prpB2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (302 aa)
smcChromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1162 aa)
dnaXDNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (697 aa)
KMT56690.1Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (112 aa)
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (200 aa)
KMT56718.1ATP-dependent helicase HrpA; Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; Derived by automated computational analysis using gene prediction method: Protein Homology. (1303 aa)
KMT56749.1DTW domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
KMT56761.1Controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DnaA family. HdA subfamily. (234 aa)
KMT56787.1ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (708 aa)
phhB4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)
KMT56848.1Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
KMT56856.1Terpene utilization protein AtuA; Derived by automated computational analysis using gene prediction method: Protein Homology. (592 aa)
KMT56857.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
alcAllantoicase; Catalyzes the formation of S-ureidoglycolate and urea from allantoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the allantoicase family. (331 aa)
KMT56886.1OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
KMT56897.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
mtnDAcireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. (176 aa)
KMT56941.1Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)
KMT56989.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (807 aa)
KMT56557.1Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family. (290 aa)
KMT56570.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (656 aa)
betIBetI family transcriptional regulator; Repressor involved in choline regulation of the bet genes. (197 aa)
KMT56248.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
rplS50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (116 aa)
rimM16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (178 aa)
rpsP30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. (83 aa)
KMT56278.1PTS N-acetyl-D-glucosamine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)
KMT56363.1Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
rpmA50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family. (85 aa)
rplU50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (104 aa)
KMT56415.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
KMT55846.1Fis family transcriptional regulator; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family. (106 aa)
rpmE50S ribosomal protein L31; Binds the 23S rRNA. (76 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (739 aa)
KMT55912.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
KMT55654.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
rpmB50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. (76 aa)
rpmG50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. (51 aa)
KMT55743.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
KMT55095.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. (206 aa)
KMT55126.1Ribosome hibernation promoting factor HPF; YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)
KMT55158.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
rpsI30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. (130 aa)
rplM50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa)
KMT55235.1FMN adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family. (312 aa)
rpsT30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (92 aa)
KMT55253.1Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family. (478 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (429 aa)
ispEKinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (283 aa)
rplY50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (199 aa)
KMT55322.1SET domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
rpsO30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa)
KMT55386.1Recombination and repair protein; May be involved in recombinational repair of damaged DNA. (557 aa)
KMT55400.1Inosamine-phosphate amidinotransferase 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
KMT55471.1ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (835 aa)
nadDNicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (214 aa)
KMT55508.13-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family. (227 aa)
ubiXAromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (209 aa)
eutCEthanolamine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the EutC family. (281 aa)
rplQ50S ribosomal protein L17; Is a component of the macrolide binding site in the peptidyl transferase center; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
rpsD30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa)
rpsK30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa)
rpsM30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (118 aa)
rplO50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (145 aa)
rpmD50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology. (58 aa)
rpsE30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (166 aa)
rplR50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (116 aa)
rplF50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa)
rpsH30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa)
rpsN30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
rplE50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa)
rplX50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (104 aa)
rplN50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rpsQ30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (88 aa)
rpmC50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. (63 aa)
rplP50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (137 aa)
rpsC30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (228 aa)
rplV50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (110 aa)
rpsS30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (91 aa)
rplB50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (274 aa)
rplW50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (99 aa)
rplD50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (200 aa)
rplC50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (211 aa)
rpsJ30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa)
rpsG30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rpsL30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (123 aa)
rplL50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (121 aa)
rplJ50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (166 aa)
rplA50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (231 aa)
rplK50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (143 aa)
phnW2-aminoethylphosphonate--pyruvate aminotransferase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (374 aa)
KMT54718.1ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (645 aa)
KMT54790.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
KMT54792.1Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
topADNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (873 aa)
KMT54618.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)
KMT54669.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
KMT54417.1Alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
KMT54469.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)
KMT54526.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
KMT53910.1Gluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
KMT54015.1ATP--cobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family. (192 aa)
KMT54144.1DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (464 aa)
rplI50S ribosomal protein L9; Binds to the 23S rRNA. (148 aa)
rpsR30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (76 aa)
rpsF30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (140 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (323 aa)
parCDNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (754 aa)
parEDNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (634 aa)
selOHypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (487 aa)
KMT54340.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)
KMT53695.1Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
clpSClp protease ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (122 aa)
KMT53710.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
KMT53854.13-hydroxyacyl-CoA dehydrogenase; Converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (509 aa)
KMT53417.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
KMT53449.1EVE domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
KMT53244.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
KMT53291.1Magnesium ABC transporter ATPase; P-type; involved in magnesium transport into the cytoplasm; Derived by automated computational analysis using gene prediction method: Protein Homology. (901 aa)
KMT53308.1DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. (649 aa)
KMT53348.16-carboxy-5,6,7,8-tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)
KMT53383.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
KMT53397.12OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
KMT53400.1Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)
KMT53161.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)
KMT52834.1ADP-ribosylglycohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
KMT52844.1Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
KMT52848.1Magnesium ABC transporter ATPase; P-type; involved in magnesium transport into the cytoplasm; Derived by automated computational analysis using gene prediction method: Protein Homology. (904 aa)
KMT52862.1DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
KMT52977.1Circadian clock protein KaiC; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
KMT52688.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
KMT52556.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)
KMT52578.1NADPH-dependent F420 reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
gfaGlutathione-dependent formaldehyde-activating protein; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family. (192 aa)
KMT52597.1Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (554 aa)
KMT52611.1ADP-ribosylglycohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
KMT52616.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
rpmFSome L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. (60 aa)
ihfBIntegration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (98 aa)
KMT52480.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)
KMT52497.1Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; Derived by automated computational analysis using gene prediction method: Protein Homology. (785 aa)
KMT52499.1Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
KMT52427.1DNA primase; Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
KMT52437.1DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (619 aa)
KMT52417.1DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
KMT52188.1Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
KMT52319.1Oxaloacetate decarboxylase; Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate; Belongs to the isocitrate lyase family. Oxaloacetate decarboxylase subfamily. (289 aa)
KMT52114.1DNA primase; Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (563 aa)
Your Current Organism:
Pseudomonas sp. KG01
NCBI taxonomy Id: 1674920
Other names: P. sp. KG01
Server load: low (28%) [HD]