(11 nodes) Riboflavin synthase-like beta-barrel network (Pseudomonas sp. KG01)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KMT55550.1	Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	KMT57482.1	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
	KMT57582.1	FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
	KMT56116.1	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	KMT56354.1	Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family. (393 aa)
	antC	Anthranilate dioxygenase reductase; Catalyzes the formation of catechol from anthranilate; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	KMT55195.1	Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (841 aa)
	KMT55430.1	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
	KMT54034.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	KMT53458.1	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	KMT52370.1	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)

Your Current Organism:

Pseudomonas sp. KG01

NCBI taxonomy Id: 1674920
Other names: P. sp. KG01

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KMT52370.1	KMT53458.1	ACR52_28670	ACR52_21795	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
KMT52370.1	KMT54034.1	ACR52_28670	ACR52_17980	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.846
KMT52370.1	KMT55195.1	ACR52_28670	ACR52_11525	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
KMT52370.1	KMT55430.1	ACR52_28670	ACR52_12805	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.435
KMT52370.1	KMT56116.1	ACR52_28670	ACR52_06980	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.780
KMT52370.1	KMT56354.1	ACR52_28670	ACR52_08215	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family.	0.837
KMT52370.1	antC	ACR52_28670	ACR52_08505	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anthranilate dioxygenase reductase; Catalyzes the formation of catechol from anthranilate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.873
KMT53458.1	KMT52370.1	ACR52_21795	ACR52_28670	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
KMT53458.1	KMT54034.1	ACR52_21795	ACR52_17980	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
KMT53458.1	KMT55195.1	ACR52_21795	ACR52_11525	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
KMT53458.1	KMT55430.1	ACR52_21795	ACR52_12805	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.764
KMT53458.1	KMT55550.1	ACR52_21795	ACR52_13445	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.523
KMT53458.1	KMT56116.1	ACR52_21795	ACR52_06980	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.846
KMT53458.1	KMT56354.1	ACR52_21795	ACR52_08215	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family.	0.887
KMT53458.1	KMT57482.1	ACR52_21795	ACR52_02335	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.764
KMT53458.1	antC	ACR52_21795	ACR52_08505	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anthranilate dioxygenase reductase; Catalyzes the formation of catechol from anthranilate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
KMT54034.1	KMT52370.1	ACR52_17980	ACR52_28670	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.846
KMT54034.1	KMT53458.1	ACR52_17980	ACR52_21795	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
KMT54034.1	KMT55195.1	ACR52_17980	ACR52_11525	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
KMT54034.1	KMT55430.1	ACR52_17980	ACR52_12805	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.764