(11 nodes) Galactose metabolism network (Pseudomonas sp. KG01)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KMT52222.1	Converts D-sorbitol to L-sorbose; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	KMT56519.1	Galactonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
	KMT56520.1	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
	KMT56521.1	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
	KMT55736.1	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
	KMT54887.1	RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	KMT54912.1	Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	KMT54520.1	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)
	glk	Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family. (318 aa)
	KMT52873.1	UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
	KMT52289.1	Aldose epimerase; Converts alpha-aldose to the beta-anomer. (382 aa)

Your Current Organism:

Pseudomonas sp. KG01

NCBI taxonomy Id: 1674920
Other names: P. sp. KG01

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KMT52222.1	KMT54520.1	ACR52_27855	ACR52_16995	Converts D-sorbitol to L-sorbose; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
KMT52222.1	KMT55736.1	ACR52_27855	ACR52_10240	Converts D-sorbitol to L-sorbose; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
KMT52289.1	KMT54520.1	ACR52_28220	ACR52_16995	Aldose epimerase; Converts alpha-aldose to the beta-anomer.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.691
KMT52289.1	KMT55736.1	ACR52_28220	ACR52_10240	Aldose epimerase; Converts alpha-aldose to the beta-anomer.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.542
KMT52289.1	KMT56520.1	ACR52_28220	ACR52_05910	Aldose epimerase; Converts alpha-aldose to the beta-anomer.	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
KMT52289.1	glk	ACR52_28220	ACR52_18040	Aldose epimerase; Converts alpha-aldose to the beta-anomer.	Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.	0.731
KMT52873.1	KMT54520.1	ACR52_24835	ACR52_16995	UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
KMT52873.1	KMT55736.1	ACR52_24835	ACR52_10240	UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
KMT54520.1	KMT52222.1	ACR52_16995	ACR52_27855	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Converts D-sorbitol to L-sorbose; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
KMT54520.1	KMT52289.1	ACR52_16995	ACR52_28220	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldose epimerase; Converts alpha-aldose to the beta-anomer.	0.691
KMT54520.1	KMT52873.1	ACR52_16995	ACR52_24835	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
KMT54520.1	KMT54912.1	ACR52_16995	ACR52_14060	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.677
KMT54520.1	KMT55736.1	ACR52_16995	ACR52_10240	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
KMT54520.1	KMT56520.1	ACR52_16995	ACR52_05910	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.692
KMT54520.1	glk	ACR52_16995	ACR52_18040	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.	0.768
KMT54887.1	KMT55736.1	ACR52_13935	ACR52_10240	RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
KMT54887.1	KMT56520.1	ACR52_13935	ACR52_05910	RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
KMT54887.1	glk	ACR52_13935	ACR52_18040	RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.	0.499
KMT54912.1	KMT54520.1	ACR52_14060	ACR52_16995	Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.677
KMT54912.1	KMT55736.1	ACR52_14060	ACR52_10240	Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598