STRINGSTRING
crtQ crtQ crtB crtB pds pds Pro_0584 Pro_0584 lcyE lcyE lcyB lcyB smtA-5 smtA-5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
crtQZeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. (486 aa)
crtBPhytoene synthase, CrtB. (303 aa)
pdsPhytoene dehydrogenase, phytoene desaturase. (469 aa)
Pro_0584Phytoene dehydrogenase / carotenoid isomerase. (521 aa)
lcyELycopene epsilon cyclase. (428 aa)
lcyBLycopene beta cyclase related dehydrogenase. (409 aa)
smtA-5SAM-dependent methyltransferase. (215 aa)
Your Current Organism:
Prochlorococcus marinus CCMP1375
NCBI taxonomy Id: 167539
Other names: P. marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus SS120, Prochlorococcus marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus subsp. marinus str. SS120
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