STRINGSTRING
pola2 pola2 dscc1 dscc1 rad9a rad9a ENSPKIP00000000392 ENSPKIP00000000392 rev3l rev3l CDCA7L CDCA7L recql4 recql4 pold1 pold1 rad52 rad52 polh polh Mlh1 Mlh1 ctc1 ctc1 ENSPKIP00000004764 ENSPKIP00000004764 chtf8 chtf8 Atr Atr mcm3 mcm3 Mre11 Mre11 ENSPKIP00000006289 ENSPKIP00000006289 brca1 brca1 rfc4 rfc4 LOC111856126 LOC111856126 cdc6 cdc6 recql5 recql5 pole2 pole2 bard1 bard1 prim1 prim1 ENSPKIP00000009032 ENSPKIP00000009032 cdc45 cdc45 mcm2 mcm2 poli poli rad50 rad50 Pole Pole ENSPKIP00000010323 ENSPKIP00000010323 Atrip Atrip ENSPKIP00000011013 ENSPKIP00000011013 fbh1 fbh1 ENSPKIP00000011270 ENSPKIP00000011270 Rbbp8 Rbbp8 ENSPKIP00000011404 ENSPKIP00000011404 pole3 pole3 pole4 pole4 orc5 orc5 dbf4 dbf4 Gins2 Gins2 Nbn Nbn mcm10 mcm10 brip1 brip1 stn1 stn1 Fancm Fancm ENSPKIP00000013407 ENSPKIP00000013407 PCNA PCNA brca2 brca2 Msh4 Msh4 pold2 pold2 HUS1B HUS1B LOC111834000 LOC111834000 meiob meiob ENSPKIP00000014968 ENSPKIP00000014968 mcm4 mcm4 ENSPKIP00000016002 ENSPKIP00000016002 msh6 msh6 mcm7 mcm7 LOC111845217 LOC111845217 mlh3 mlh3 NTHL1 NTHL1 Bivm Bivm rad51 rad51 apex1 apex1 rhno1 rhno1 orc4 orc4 orc2 orc2 ENSPKIP00000018352 ENSPKIP00000018352 rfc1 rfc1 rpa2 rpa2 timeless timeless orc6 orc6 wdhd1 wdhd1 Atad5 Atad5 LOC111834097 LOC111834097 mcmbp mcmbp rad1 rad1 gmnn gmnn ENSPKIP00000022716 ENSPKIP00000022716 gins4 gins4 Gen1 Gen1 ENSPKIP00000023299 ENSPKIP00000023299 rad9b rad9b ENSPKIP00000023362 ENSPKIP00000023362 ENSPKIP00000023394 ENSPKIP00000023394 ENSPKIP00000023558 ENSPKIP00000023558 rad51b rad51b apex2 apex2 LOC111850128 LOC111850128 ercc1 ercc1 Exd2 Exd2 fen1 fen1 rpa1 rpa1 ENSPKIP00000025196 ENSPKIP00000025196 cdt1 cdt1 DNA2 DNA2 PIEZO2 PIEZO2 pms2 pms2 pif1 pif1 ANKRD11 ANKRD11 tdrd3 tdrd3 msh2 msh2 ercc5 ercc5 blm blm rfc5 rfc5 ENSPKIP00000027017 ENSPKIP00000027017 PWWP2A PWWP2A mcmdc2 mcmdc2 xrcc3 xrcc3 ENSPKIP00000027503 ENSPKIP00000027503 gins1 gins1 rpa3 rpa3 mcm6 mcm6 rad51d rad51d Rev1 Rev1 topbp1 topbp1 orc1 orc1 slf1 slf1 rad17 rad17 chek2 chek2 Atm Atm msh5 msh5 palb2 palb2 top3b top3b rad51c rad51c mcm9 mcm9 mad2l2 mad2l2 msh3 msh3 pms1 pms1 Pold4 Pold4 gins3 gins3 rfc2 rfc2 Mcph1 Mcph1 polk polk tipin tipin mcm8 mcm8 tp53bp1 tp53bp1 Lig1 Lig1 orc3 orc3 ercc4 ercc4 rfc3 rfc3 ercc6 ercc6 top3a top3a XRCC2 XRCC2 Xpa Xpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pola2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (604 aa)
dscc1DNA replication and sister chromatid cohesion 1. (394 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (399 aa)
ENSPKIP00000000392AAA domain-containing protein. (944 aa)
rev3lREV3 like, DNA directed polymerase zeta catalytic subunit. (3106 aa)
CDCA7LCell division cycle associated 7 like. (311 aa)
recql4RecQ helicase-like 4. (1512 aa)
pold1DNA polymerase. (1105 aa)
rad52RAD52 homolog, DNA repair protein. (448 aa)
polhPolymerase (DNA directed), eta. (713 aa)
Mlh1MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (776 aa)
ctc1Uncharacterized protein. (1337 aa)
ENSPKIP00000004764RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae). (494 aa)
chtf8CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae). (155 aa)
AtrATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2574 aa)
mcm3DNA helicase; Belongs to the MCM family. (808 aa)
Mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (713 aa)
ENSPKIP00000006289Ig-like domain-containing protein. (136 aa)
brca1Uncharacterized protein. (1439 aa)
rfc4Replication factor C (activator 1) 4. (357 aa)
LOC111856126DBF4-type domain-containing protein. (781 aa)
cdc6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (559 aa)
recql5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (997 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
bard1BRCA1 associated RING domain 1. (759 aa)
prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (461 aa)
ENSPKIP00000009032DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (506 aa)
cdc45CDC45 cell division cycle 45 homolog (S. cerevisiae). (568 aa)
mcm2DNA helicase; Belongs to the MCM family. (899 aa)
poliPolymerase (DNA directed) iota. (660 aa)
rad50RAD50 homolog, double strand break repair protein. (1313 aa)
PoleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2251 aa)
ENSPKIP00000010323DNA polymerase. (1377 aa)
AtripATR interacting protein. (758 aa)
ENSPKIP00000011013WRN RecQ like helicase. (1122 aa)
fbh1F-box DNA helicase 1. (1055 aa)
ENSPKIP00000011270SAE2 domain-containing protein. (94 aa)
Rbbp8CtIP_N domain-containing protein. (552 aa)
ENSPKIP00000011404Polymerase (DNA-directed), delta 3, accessory subunit. (395 aa)
pole3Polymerase (DNA directed), epsilon 3 (p17 subunit). (148 aa)
pole4Polymerase (DNA-directed), epsilon 4, accessory subunit. (122 aa)
orc5Origin recognition complex, subunit 5. (443 aa)
dbf4DBF4 zinc finger. (596 aa)
Gins2GINS complex subunit 2. (273 aa)
NbnNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (777 aa)
mcm10Minichromosome maintenance 10 replication initiation factor. (821 aa)
brip1BRCA1 interacting protein C-terminal helicase 1. (1442 aa)
stn1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (377 aa)
FancmERCC4 domain-containing protein. (508 aa)
ENSPKIP00000013407Helicase ATP-binding domain-containing protein. (434 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
brca2BRCA2 DNA repair associated. (2995 aa)
Msh4DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (867 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (470 aa)
HUS1BCheckpoint protein; Belongs to the HUS1 family. (280 aa)
LOC111834000DNA helicase; Belongs to the MCM family. (815 aa)
meiobMethionine sulfoxide reductase B1b. (468 aa)
ENSPKIP00000014968FHA domain-containing protein. (1811 aa)
mcm4DNA helicase; Belongs to the MCM family. (861 aa)
ENSPKIP00000016002Uncharacterized protein. (385 aa)
msh6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1374 aa)
mcm7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (727 aa)
LOC111845217Si:ch211-141o9.10. (520 aa)
mlh3MutL homolog 3 (E. coli). (1346 aa)
NTHL1Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (287 aa)
BivmBasic, immunoglobulin-like variable motif containing. (497 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (338 aa)
apex1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (314 aa)
rhno1Si:ch73-352p4.5. (308 aa)
orc4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (479 aa)
orc2Origin recognition complex, subunit 2. (541 aa)
ENSPKIP00000018352Cell division cycle 7 homolog (S. cerevisiae); Belongs to the protein kinase superfamily. (469 aa)
rfc1Replication factor C subunit 1. (1155 aa)
rpa2Replication protein A2. (339 aa)
timelessTimeless circadian clock. (1246 aa)
orc6Origin recognition complex, subunit 6. (277 aa)
wdhd1WD repeat and HMG-box DNA binding protein 1. (1122 aa)
Atad5ATPase family AAA domain containing 5a. (1761 aa)
LOC111834097Zgc:110269. (346 aa)
mcmbpMinichromosome maintenance complex binding protein. (664 aa)
rad1RAD1 homolog (S. pombe). (317 aa)
gmnnGeminin DNA replication inhibitor. (230 aa)
ENSPKIP00000022716DNA helicase; Belongs to the MCM family. (664 aa)
gins4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (222 aa)
Gen1Uncharacterized protein. (928 aa)
ENSPKIP00000023299TEN1 subunit of CST complex. (131 aa)
rad9bRAD9 checkpoint clamp component B. (416 aa)
ENSPKIP00000023362Uncharacterized protein. (578 aa)
ENSPKIP00000023394Uncharacterized protein. (302 aa)
ENSPKIP00000023558Piezo-type mechanosensitive ion channel component. (2585 aa)
rad51bRAD51 paralog B. (384 aa)
apex2DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (560 aa)
LOC111850128DNA helicase; Belongs to the MCM family. (806 aa)
ercc1Excision repair cross-complementation group 1. (325 aa)
Exd2Exonuclease 3'-5' domain containing 2. (630 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (610 aa)
ENSPKIP00000025196Piezo-type mechanosensitive ion channel component. (2347 aa)
cdt1Chromatin licensing and DNA replication factor 1. (655 aa)
DNA2DNA replication helicase/nuclease 2. (1345 aa)
PIEZO2Piezo-type mechanosensitive ion channel component. (2715 aa)
pms2PMS1 homolog 2, mismatch repair system component. (855 aa)
pif1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (716 aa)
ANKRD11Ankyrin repeat domain 11. (2812 aa)
tdrd3Tudor domain containing 3. (704 aa)
msh2MutS homolog 2 (E. coli); Component of the post-replicative DNA mismatch repair system (MMR). (786 aa)
ercc5Excision repair cross-complementation group 5. (1172 aa)
blmBLM RecQ like helicase. (1442 aa)
rfc5Replication factor C (activator 1) 5. (336 aa)
ENSPKIP00000027017Chemokine (C-C motif) ligand 44. (257 aa)
PWWP2APWWP domain containing 2A. (1028 aa)
mcmdc2Uncharacterized protein. (731 aa)
xrcc3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (357 aa)
ENSPKIP00000027503Exonuclease 1. (575 aa)
gins1GINS complex subunit 1 (Psf1 homolog). (206 aa)
rpa3Replication protein A3. (123 aa)
mcm6DNA helicase; Belongs to the MCM family. (815 aa)
rad51dRAD51 paralog D. (342 aa)
Rev1DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1188 aa)
topbp1DNA topoisomerase II binding protein 1. (1524 aa)
orc1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (909 aa)
slf1SMC5-SMC6 complex localization factor 1. (885 aa)
rad17RAD17 checkpoint clamp loader component. (681 aa)
chek2Checkpoint kinase 2. (507 aa)
AtmNon-specific serine/threonine protein kinase. (3029 aa)
msh5MutS homolog 5. (810 aa)
palb2PALB2_WD40 domain-containing protein. (1433 aa)
top3bDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (863 aa)
rad51cRAD51 paralog C. (374 aa)
mcm9Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family. (1146 aa)
mad2l2Mitotic arrest deficient 2 like 2. (251 aa)
msh3DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1092 aa)
pms1PMS1 homolog 1, mismatch repair system component. (874 aa)
Pold4Si:dkey-28b4.7. (121 aa)
gins3GINS complex subunit 3. (211 aa)
rfc2Replication factor C (activator 1) 2. (351 aa)
Mcph1Microcephalin 1. (889 aa)
polkPolymerase (DNA directed) kappa. (894 aa)
tipinTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (286 aa)
mcm8Minichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family. (866 aa)
tp53bp1Tumor protein p53 binding protein, 1. (1913 aa)
Lig1DNA ligase. (964 aa)
orc3Origin recognition complex, subunit 3. (723 aa)
ercc4Excision repair cross-complementation group 4. (893 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
ercc6Excision repair cross-complementation group 6. (1376 aa)
top3aDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (989 aa)
XRCC2X-ray repair cross complementing 2. (284 aa)
XpaXeroderma pigmentosum, complementation group A. (272 aa)
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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