STRINGSTRING
atg7 atg7 LOC111833948 LOC111833948 LOC111850628 LOC111850628 nbr1 nbr1 atg12 atg12 atg3 atg3 atg4a atg4a LOC111851952 LOC111851952 WIPI1 WIPI1 WIPI2 WIPI2 ENSPKIP00000030543 ENSPKIP00000030543 LOC111841480 LOC111841480 ENSPKIP00000032727 ENSPKIP00000032727 atg5 atg5 sqstm1 sqstm1 LOC111854085 LOC111854085
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atg7ATG7 autophagy related 7 homolog (S. cerevisiae). (719 aa)
LOC111833948Zgc:92606. (132 aa)
LOC111850628Uncharacterized protein. (122 aa)
nbr1NBR1 autophagy cargo receptor a. (963 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (120 aa)
atg3Autophagy-related protein 3. (315 aa)
atg4aCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (410 aa)
LOC111851952GABA type A receptor associated protein like 2. (117 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (492 aa)
WIPI2WD repeat domain, phosphoinositide interacting 2. (424 aa)
ENSPKIP00000030543Unc-51 like autophagy activating kinase 2. (1037 aa)
LOC111841480ATG16 autophagy related 16-like 2 (S. cerevisiae). (581 aa)
ENSPKIP00000032727ATG16 autophagy related 16-like 1 (S. cerevisiae). (586 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
sqstm1Sequestosome 1. (421 aa)
LOC111854085WD repeat domain, phosphoinositide interacting 2. (425 aa)
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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