(5 nodes) CLOCK-BMAL transcription complex, and Photoreactive repair network (Paramormyrops kingsleyae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bhlhe41	Basic helix-loop-helix family, member e41. (454 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator-like 1a. (671 aa)
	LOC111838721	Cryptochrome circadian regulator 1b. (659 aa)
	Clock	Clock circadian regulator a. (874 aa)
	LOC111847548	Period circadian clock 2. (1434 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARNTL	Clock	ENSPKIP00000006197	ENSPKIP00000016926	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Clock circadian regulator a.	0.833
ARNTL	LOC111838721	ENSPKIP00000006197	ENSPKIP00000009519	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Cryptochrome circadian regulator 1b.	0.769
ARNTL	LOC111847548	ENSPKIP00000006197	ENSPKIP00000022115	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Period circadian clock 2.	0.753
ARNTL	bhlhe41	ENSPKIP00000006197	ENSPKIP00000000928	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Basic helix-loop-helix family, member e41.	0.471
Clock	ARNTL	ENSPKIP00000016926	ENSPKIP00000006197	Clock circadian regulator a.	Aryl hydrocarbon receptor nuclear translocator-like 1a.	0.833
Clock	LOC111838721	ENSPKIP00000016926	ENSPKIP00000009519	Clock circadian regulator a.	Cryptochrome circadian regulator 1b.	0.803
Clock	LOC111847548	ENSPKIP00000016926	ENSPKIP00000022115	Clock circadian regulator a.	Period circadian clock 2.	0.765
Clock	bhlhe41	ENSPKIP00000016926	ENSPKIP00000000928	Clock circadian regulator a.	Basic helix-loop-helix family, member e41.	0.532
LOC111838721	ARNTL	ENSPKIP00000009519	ENSPKIP00000006197	Cryptochrome circadian regulator 1b.	Aryl hydrocarbon receptor nuclear translocator-like 1a.	0.769
LOC111838721	Clock	ENSPKIP00000009519	ENSPKIP00000016926	Cryptochrome circadian regulator 1b.	Clock circadian regulator a.	0.803
LOC111838721	LOC111847548	ENSPKIP00000009519	ENSPKIP00000022115	Cryptochrome circadian regulator 1b.	Period circadian clock 2.	0.774
LOC111838721	bhlhe41	ENSPKIP00000009519	ENSPKIP00000000928	Cryptochrome circadian regulator 1b.	Basic helix-loop-helix family, member e41.	0.600
LOC111847548	ARNTL	ENSPKIP00000022115	ENSPKIP00000006197	Period circadian clock 2.	Aryl hydrocarbon receptor nuclear translocator-like 1a.	0.753
LOC111847548	Clock	ENSPKIP00000022115	ENSPKIP00000016926	Period circadian clock 2.	Clock circadian regulator a.	0.765
LOC111847548	LOC111838721	ENSPKIP00000022115	ENSPKIP00000009519	Period circadian clock 2.	Cryptochrome circadian regulator 1b.	0.774
LOC111847548	bhlhe41	ENSPKIP00000022115	ENSPKIP00000000928	Period circadian clock 2.	Basic helix-loop-helix family, member e41.	0.793
bhlhe41	ARNTL	ENSPKIP00000000928	ENSPKIP00000006197	Basic helix-loop-helix family, member e41.	Aryl hydrocarbon receptor nuclear translocator-like 1a.	0.471
bhlhe41	Clock	ENSPKIP00000000928	ENSPKIP00000016926	Basic helix-loop-helix family, member e41.	Clock circadian regulator a.	0.532
bhlhe41	LOC111838721	ENSPKIP00000000928	ENSPKIP00000009519	Basic helix-loop-helix family, member e41.	Cryptochrome circadian regulator 1b.	0.600
bhlhe41	LOC111847548	ENSPKIP00000000928	ENSPKIP00000022115	Basic helix-loop-helix family, member e41.	Period circadian clock 2.	0.793