(44 nodes) Formation of a pool of free 40S subunits network (Paramormyrops kingsleyae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (81 aa)
	Rpl39	Ribosomal protein L39. (49 aa)
	rpl31	Ribosomal protein L31. (125 aa)
	rps11	Si:dkey-159f12.2; Belongs to the universal ribosomal protein uS17 family. (159 aa)
	rpl37	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	RPL37A	Ribosomal protein L37a. (68 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	rpl17	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (184 aa)
	RPS17	Ribosomal protein S17. (134 aa)
	ENSPKIP00000007694	Uncharacterized protein. (59 aa)
	rpl14	Ribosomal protein L14. (142 aa)
	rps3	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (261 aa)
	rps12	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (132 aa)
	rps19	Ribosomal protein S19. (145 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (66 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	rpl12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (202 aa)
	rpl27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (278 aa)
	rpl34	Ribosomal protein L34. (135 aa)
	rpl13a	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
	rpl6	Ribosomal protein L6. (264 aa)
	rpl13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (223 aa)
	LOC111860719	Ribosomal protein L26. (145 aa)
	Rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (263 aa)
	LOC111855043	Ribosomal protein S10. (184 aa)
	RPL9	Ribosomal protein L9. (242 aa)
	rpsa	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (309 aa)
	ENSPKIP00000025042	Ribosomal protein S28. (53 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (131 aa)
	rack1	Receptor for activated C kinase 1. (317 aa)
	rpl36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (126 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	RPS20	Ribosomal protein S20. (135 aa)
	rps8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (210 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	rpl38	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	Rps9	Ribosomal_S4 domain-containing protein. (79 aa)
	rpl23a	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (155 aa)
	Rpl21	Ribosomal protein L21. (163 aa)
	rpl35a	Ribosomal protein L35a. (157 aa)
	rpl28	Ribosomal protein L28. (137 aa)
	rpl4	Ribosomal protein L4. (404 aa)
	rplp0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (316 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPKIP00000007694	ENSPKIP00000025042	ENSPKIP00000007694	ENSPKIP00000025042	Uncharacterized protein.	Ribosomal protein S28.	0.999
ENSPKIP00000007694	LOC111855043	ENSPKIP00000007694	ENSPKIP00000017401	Uncharacterized protein.	Ribosomal protein S10.	0.999
ENSPKIP00000007694	LOC111860719	ENSPKIP00000007694	ENSPKIP00000016384	Uncharacterized protein.	Ribosomal protein L26.	0.999
ENSPKIP00000007694	RPL37A	ENSPKIP00000007694	ENSPKIP00000002227	Uncharacterized protein.	Ribosomal protein L37a.	0.999
ENSPKIP00000007694	RPL9	ENSPKIP00000007694	ENSPKIP00000019146	Uncharacterized protein.	Ribosomal protein L9.	0.999
ENSPKIP00000007694	RPS17	ENSPKIP00000007694	ENSPKIP00000007206	Uncharacterized protein.	Ribosomal protein S17.	0.999
ENSPKIP00000007694	RPS20	ENSPKIP00000007694	ENSPKIP00000029138	Uncharacterized protein.	Ribosomal protein S20.	0.999
ENSPKIP00000007694	Rpl21	ENSPKIP00000007694	ENSPKIP00000034112	Uncharacterized protein.	Ribosomal protein L21.	0.999
ENSPKIP00000007694	Rpl39	ENSPKIP00000007694	ENSPKIP00000000873	Uncharacterized protein.	Ribosomal protein L39.	0.999
ENSPKIP00000007694	Rps7	ENSPKIP00000007694	ENSPKIP00000017025	Uncharacterized protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
ENSPKIP00000007694	Rps9	ENSPKIP00000007694	ENSPKIP00000031565	Uncharacterized protein.	Ribosomal_S4 domain-containing protein.	0.999
ENSPKIP00000007694	rack1	ENSPKIP00000007694	ENSPKIP00000025800	Uncharacterized protein.	Receptor for activated C kinase 1.	0.999
ENSPKIP00000007694	rpl12	ENSPKIP00000007694	ENSPKIP00000011574	Uncharacterized protein.	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.999
ENSPKIP00000007694	rpl13	ENSPKIP00000007694	ENSPKIP00000014901	Uncharacterized protein.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
ENSPKIP00000007694	rpl13a	ENSPKIP00000007694	ENSPKIP00000013197	Uncharacterized protein.	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.	0.999
ENSPKIP00000007694	rpl14	ENSPKIP00000007694	ENSPKIP00000008555	Uncharacterized protein.	Ribosomal protein L14.	0.999
ENSPKIP00000007694	rpl15	ENSPKIP00000007694	ENSPKIP00000028046	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
ENSPKIP00000007694	rpl17	ENSPKIP00000007694	ENSPKIP00000004870	Uncharacterized protein.	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.	0.999
ENSPKIP00000007694	rpl23a	ENSPKIP00000007694	ENSPKIP00000033633	Uncharacterized protein.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.999
ENSPKIP00000007694	rpl27	ENSPKIP00000007694	ENSPKIP00000011655	Uncharacterized protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999