STRINGSTRING
ENSPKIP00000000214 ENSPKIP00000000214 LOC111857255 LOC111857255 ENSPKIP00000000609 ENSPKIP00000000609 LOC111840998 LOC111840998 ENSPKIP00000000848 ENSPKIP00000000848 LOC111847999 LOC111847999 LOC111850394 LOC111850394 LOC111853522 LOC111853522 ENSPKIP00000005610 ENSPKIP00000005610 LOC111856763 LOC111856763 ENSPKIP00000006485 ENSPKIP00000006485 WTAP WTAP LOC111848696 LOC111848696 ENSPKIP00000009624 ENSPKIP00000009624 ENSPKIP00000009634 ENSPKIP00000009634 ENSPKIP00000009645 ENSPKIP00000009645 ENSPKIP00000009674 ENSPKIP00000009674 LOC111840563 LOC111840563 rbmx rbmx LOC111840548 LOC111840548 CELF2 CELF2 LOC111838760 LOC111838760 RBM38 RBM38 CELF2-2 CELF2-2 ythdc1 ythdc1 Rest Rest nsrp1 nsrp1 ENSPKIP00000012344 ENSPKIP00000012344 NOVA1 NOVA1 fmr1 fmr1 SNRPC SNRPC rbm24 rbm24 sap18 sap18 LOC111848172 LOC111848172 KHDRBS3 KHDRBS3 LOC111845294 LOC111845294 LOC111855045 LOC111855045 LOC111855036 LOC111855036 rbm25 rbm25 ENSPKIP00000017741 ENSPKIP00000017741 LOC111848218 LOC111848218 LOC111834077 LOC111834077 Magoh Magoh LOC111844047 LOC111844047 DDX5 DDX5 ENSPKIP00000023095 ENSPKIP00000023095 zc3h10 zc3h10 ENSPKIP00000023921 ENSPKIP00000023921 LOC111843288 LOC111843288 DDX17 DDX17 srrm4 srrm4 ENSPKIP00000027533 ENSPKIP00000027533 LOC111850867 LOC111850867 Rbm15b Rbm15b rbfox3 rbfox3 LOC111853312 LOC111853312 ENSPKIP00000029706 ENSPKIP00000029706 LOC111836699 LOC111836699 LOC111834942 LOC111834942 Khdrbs1 Khdrbs1 LOC111853356 LOC111853356 LOC111854644 LOC111854644 fam172a fam172a celf1 celf1 smu1 smu1 RBM15 RBM15 ENSPKIP00000034685 ENSPKIP00000034685 FXR1 FXR1 ENSPKIP00000037833 ENSPKIP00000037833 rbm7 rbm7 eif4a3 eif4a3 Celf4 Celf4 LOC111835034 LOC111835034 RBM38-2 RBM38-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPKIP00000000214RRM domain-containing protein. (168 aa)
LOC111857255RNA binding motif protein 11. (222 aa)
ENSPKIP00000000609Uncharacterized protein. (576 aa)
LOC111840998Ribonucleoprotein, PTB-binding 2. (800 aa)
ENSPKIP00000000848RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. (334 aa)
LOC111847999Uncharacterized protein. (490 aa)
LOC111850394RNA binding motif protein 24b. (231 aa)
LOC111853522RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (172 aa)
ENSPKIP00000005610RRM domain-containing protein. (184 aa)
LOC111856763RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events. (343 aa)
ENSPKIP00000006485WT1 associated protein. (173 aa)
WTAPUncharacterized protein. (219 aa)
LOC111848696Uncharacterized protein. (513 aa)
ENSPKIP00000009624RRM domain-containing protein. (124 aa)
ENSPKIP00000009634Uncharacterized protein. (110 aa)
ENSPKIP00000009645RRM domain-containing protein. (130 aa)
ENSPKIP00000009674KH domain containing, RNA binding, signal transduction associated 1b. (352 aa)
LOC111840563RNA binding motif protein 5. (857 aa)
rbmxRNA binding motif protein X-linked. (381 aa)
LOC111840548RNA binding motif protein 6. (1333 aa)
CELF2CUGBP Elav-like family member 2. (538 aa)
LOC111838760Fragile X mental retardation, autosomal homolog 2. (668 aa)
RBM38RNA binding motif protein 38. (242 aa)
CELF2-2CUGBP Elav-like family member 2. (531 aa)
ythdc1YTH domain containing 1. (714 aa)
RestRE1-silencing transcription factor. (1088 aa)
nsrp1Nuclear speckle splicing regulatory protein 1. (459 aa)
ENSPKIP00000012344Uncharacterized protein. (241 aa)
NOVA1NOVA alternative splicing regulator 1. (489 aa)
fmr1Fragile X mental retardation 1. (642 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
rbm24RNA binding motif protein 24a. (237 aa)
sap18Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (153 aa)
LOC111848172Fragile X mental retardation, autosomal homolog 1. (684 aa)
KHDRBS3KH RNA binding domain containing, signal transduction associated 3. (344 aa)
LOC111845294Uncharacterized protein; Belongs to the DEAD box helicase family. (677 aa)
LOC111855045Uncharacterized protein. (833 aa)
LOC111855036U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (164 aa)
rbm25RNA binding motif protein 25b. (825 aa)
ENSPKIP00000017741Qua1 domain-containing protein. (84 aa)
LOC111848218Si:dkey-205h23.2. (542 aa)
LOC111834077Poly-U binding splicing factor a. (535 aa)
MagohUncharacterized protein. (175 aa)
LOC111844047Neuro-oncological ventral antigen 2. (498 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (611 aa)
ENSPKIP00000023095RRM domain-containing protein. (518 aa)
zc3h10Zinc finger CCCH-type containing 10. (557 aa)
ENSPKIP00000023921RNA binding motif protein 10. (953 aa)
LOC111843288DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (622 aa)
DDX17DEAD-box helicase 17; Belongs to the DEAD box helicase family. (672 aa)
srrm4Serine/arginine repetitive matrix 4. (583 aa)
ENSPKIP00000027533RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (235 aa)
LOC111850867RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. (429 aa)
Rbm15bRNA binding motif protein 15B. (569 aa)
rbfox3RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events. (438 aa)
LOC111853312Cugbp, Elav-like family member 3b. (457 aa)
ENSPKIP00000029706RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events. (346 aa)
LOC111836699Cugbp, Elav-like family member 5b. (520 aa)
LOC111834942Mago homolog, exon junction complex subunit. (147 aa)
Khdrbs1KH domain containing, RNA binding, signal transduction associated 1a. (342 aa)
LOC111853356RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (384 aa)
LOC111854644Poly-U binding splicing factor b. (525 aa)
fam172aFamily with sequence similarity 172 member A. (452 aa)
celf1Cugbp, Elav-like family member 1. (479 aa)
smu1SMU1 DNA replication regulator and spliceosomal factor b. (513 aa)
RBM15RNA binding motif protein 15. (813 aa)
ENSPKIP00000034685Ribonucleoprotein, PTB-binding 2. (425 aa)
FXR1FMR1 autosomal homolog 1. (647 aa)
ENSPKIP00000037833Ribonucleoprotein, PTB-binding 1. (320 aa)
rbm7RNA binding motif protein 7. (251 aa)
eif4a3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
Celf4CUGBP, Elav-like family member 4. (502 aa)
LOC111835034RNA binding motif protein X-linked. (375 aa)
RBM38-2RNA binding motif protein 38. (228 aa)
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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