35 items (Paramormyrops kingsleyae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPKIP00000012209	TLR4 interactor with leucine-rich repeats. (710 aa)
	LOC111844360	Interleukin-1 receptor-associated kinase 3. (619 aa)
	LOC111854838	Toll-like receptor 21. (1001 aa)
	ENSPKIP00000003228	Uncharacterized protein. (221 aa)
	LOC111841750	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (310 aa)
	LOC111837588	MAPK activated protein kinase 3; Belongs to the protein kinase superfamily. (403 aa)
	irak1	Interleukin-1 receptor-associated kinase 1. (716 aa)
	tlr3	Toll-like receptor 3; Belongs to the Toll-like receptor family. (916 aa)
	LOC111840606	MAPK activated protein kinase 3; Belongs to the protein kinase superfamily. (409 aa)
	pik3ap1	Phosphoinositide-3-kinase adaptor protein 1. (854 aa)
	tnip1	TNFAIP3 interacting protein 1. (654 aa)
	LOC111836729	TIR domain-containing protein; Belongs to the Toll-like receptor family. (814 aa)
	ENSPKIP00000033701	TIR domain-containing protein; Belongs to the Toll-like receptor family. (829 aa)
	LOC111850919	Raftlin, lipid raft linker 1a. (633 aa)
	MAPKAPK2	MAPK activated protein kinase 2; Belongs to the protein kinase superfamily. (386 aa)
	nr1h4	Nuclear receptor subfamily 1, group H, member 4. (482 aa)
	myd88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (287 aa)
	TLR8	Toll like receptor 8; Belongs to the Toll-like receptor family. (1023 aa)
	tlr7	Toll-like receptor 7; Belongs to the Toll-like receptor family. (1057 aa)
	LOC111838449	Toll-like receptor 18. (893 aa)
	LOC111839017	Uncharacterized protein. (710 aa)
	nfkbia	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (310 aa)
	LOC111846509	TIR domain-containing protein; Belongs to the Toll-like receptor family. (824 aa)
	ENSPKIP00000026995	B30.2/SPRY domain-containing protein. (244 aa)
	LOC111853937	Nuclear receptor subfamily 1, group H, member 5. (508 aa)
	unc93b1	Unc-93 homolog B1, TLR signaling regulator. (605 aa)
	ENSPKIP00000024234	Receptor-interacting serine-threonine kinase 2. (563 aa)
	ENSPKIP00000023797	CD40 molecule, TNF receptor superfamily member 5. (274 aa)
	ENSPKIP00000021895	Interferon regulatory factor 3. (436 aa)
	LOC111847503	Si:ch73-185c24.2. (362 aa)
	mapkapk2	MAPK activated protein kinase 2; Belongs to the protein kinase superfamily. (383 aa)
	TLR5	Toll like receptor 5; Belongs to the Toll-like receptor family. (868 aa)
	ENSPKIP00000017947	Adhesion G protein-coupled receptor G1. (537 aa)
	LOC111848796	Toll-like receptor 9; Belongs to the Toll-like receptor family. (1038 aa)
	irf7	Interferon regulatory factor 7. (434 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPKIP00000017947	irak1	ENSPKIP00000017947	ENSPKIP00000008546	Adhesion G protein-coupled receptor G1.	Interleukin-1 receptor-associated kinase 1.	0.569
ENSPKIP00000017947	myd88	ENSPKIP00000017947	ENSPKIP00000031201	Adhesion G protein-coupled receptor G1.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.563
ENSPKIP00000021895	LOC111848796	ENSPKIP00000021895	ENSPKIP00000013513	Interferon regulatory factor 3.	Toll-like receptor 9; Belongs to the Toll-like receptor family.	0.504
ENSPKIP00000021895	TLR8	ENSPKIP00000021895	ENSPKIP00000031136	Interferon regulatory factor 3.	Toll like receptor 8; Belongs to the Toll-like receptor family.	0.444
ENSPKIP00000021895	irak1	ENSPKIP00000021895	ENSPKIP00000008546	Interferon regulatory factor 3.	Interleukin-1 receptor-associated kinase 1.	0.477
ENSPKIP00000021895	irf7	ENSPKIP00000021895	ENSPKIP00000012328	Interferon regulatory factor 3.	Interferon regulatory factor 7.	0.850
ENSPKIP00000021895	myd88	ENSPKIP00000021895	ENSPKIP00000031201	Interferon regulatory factor 3.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.713
ENSPKIP00000021895	tlr3	ENSPKIP00000021895	ENSPKIP00000008600	Interferon regulatory factor 3.	Toll-like receptor 3; Belongs to the Toll-like receptor family.	0.645
ENSPKIP00000021895	tlr7	ENSPKIP00000021895	ENSPKIP00000031114	Interferon regulatory factor 3.	Toll-like receptor 7; Belongs to the Toll-like receptor family.	0.444
ENSPKIP00000023797	LOC111841750	ENSPKIP00000023797	ENSPKIP00000006511	CD40 molecule, TNF receptor superfamily member 5.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.426
ENSPKIP00000023797	myd88	ENSPKIP00000023797	ENSPKIP00000031201	CD40 molecule, TNF receptor superfamily member 5.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.616
ENSPKIP00000023797	nfkbia	ENSPKIP00000023797	ENSPKIP00000028182	CD40 molecule, TNF receptor superfamily member 5.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.426
ENSPKIP00000024234	irak1	ENSPKIP00000024234	ENSPKIP00000008546	Receptor-interacting serine-threonine kinase 2.	Interleukin-1 receptor-associated kinase 1.	0.569
ENSPKIP00000024234	myd88	ENSPKIP00000024234	ENSPKIP00000031201	Receptor-interacting serine-threonine kinase 2.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.563
ENSPKIP00000026995	unc93b1	ENSPKIP00000026995	ENSPKIP00000025382	B30.2/SPRY domain-containing protein.	Unc-93 homolog B1, TLR signaling regulator.	0.591
ENSPKIP00000033701	TLR5	ENSPKIP00000033701	ENSPKIP00000015937	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Toll like receptor 5; Belongs to the Toll-like receptor family.	0.408
ENSPKIP00000033701	myd88	ENSPKIP00000033701	ENSPKIP00000031201	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.616
ENSPKIP00000033701	unc93b1	ENSPKIP00000033701	ENSPKIP00000025382	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Unc-93 homolog B1, TLR signaling regulator.	0.601
LOC111836729	LOC111838449	ENSPKIP00000034160	ENSPKIP00000029313	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Toll-like receptor 18.	0.900
LOC111836729	LOC111846509	ENSPKIP00000034160	ENSPKIP00000027899	TIR domain-containing protein; Belongs to the Toll-like receptor family.	TIR domain-containing protein; Belongs to the Toll-like receptor family.	0.902