12 items (Paramormyrops kingsleyae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111839715	Sodium/potassium-transporting ATPase subunit alpha. (1023 aa)
	LOC111833136	Sodium/potassium-transporting ATPase subunit alpha. (1013 aa)
	atp1a3	Sodium/potassium-transporting ATPase subunit alpha. (1022 aa)
	ENSPKIP00000015290	Sodium/potassium-transporting ATPase subunit alpha. (986 aa)
	ATP1A1	Sodium/potassium-transporting ATPase subunit alpha. (1004 aa)
	ENSPKIP00000019240	Uncharacterized protein. (192 aa)
	BAK1	BCL2 antagonist/killer 1. (300 aa)
	LOC111851814	Zgc:153993. (202 aa)
	LOC111855680	Sodium/potassium-transporting ATPase subunit alpha. (1031 aa)
	ATP4A	Sodium/potassium-transporting ATPase subunit alpha. (973 aa)
	Bax	BCL2 associated X, apoptosis regulator a. (194 aa)
	ENSPKIP00000030708	Sodium/potassium-transporting ATPase subunit alpha. (1025 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAK1	Bax	ENSPKIP00000020664	ENSPKIP00000004978	BCL2 antagonist/killer 1.	BCL2 associated X, apoptosis regulator a.	0.754
BAK1	ENSPKIP00000019240	ENSPKIP00000020664	ENSPKIP00000019240	BCL2 antagonist/killer 1.	Uncharacterized protein.	0.754
Bax	BAK1	ENSPKIP00000004978	ENSPKIP00000020664	BCL2 associated X, apoptosis regulator a.	BCL2 antagonist/killer 1.	0.754
Bax	LOC111851814	ENSPKIP00000004978	ENSPKIP00000021179	BCL2 associated X, apoptosis regulator a.	Zgc:153993.	0.975
ENSPKIP00000019240	BAK1	ENSPKIP00000019240	ENSPKIP00000020664	Uncharacterized protein.	BCL2 antagonist/killer 1.	0.754
ENSPKIP00000019240	LOC111851814	ENSPKIP00000019240	ENSPKIP00000021179	Uncharacterized protein.	Zgc:153993.	0.763
LOC111851814	Bax	ENSPKIP00000021179	ENSPKIP00000004978	Zgc:153993.	BCL2 associated X, apoptosis regulator a.	0.975
LOC111851814	ENSPKIP00000019240	ENSPKIP00000021179	ENSPKIP00000019240	Zgc:153993.	Uncharacterized protein.	0.763