STRINGSTRING
urb2 urb2 pold1 pold1 edem1 edem1 klhl14 klhl14 HSPB7 HSPB7 prkn prkn LOC111845244 LOC111845244 card14 card14 zbtb14 zbtb14 Rnf32 Rnf32 RANGAP1 RANGAP1 ENSPKIP00000029514 ENSPKIP00000029514 ENSPKIP00000033802 ENSPKIP00000033802 trim37 trim37 Prdm16 Prdm16 sqstm1 sqstm1 LOC111840045 LOC111840045 xrn2 xrn2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
urb2URB2 ribosome biogenesis homolog. (1535 aa)
pold1DNA polymerase. (1105 aa)
edem1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (629 aa)
klhl14Kelch-like family member 14. (604 aa)
HSPB7Heat shock protein family B (small) member 7; Belongs to the small heat shock protein (HSP20) family. (150 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (483 aa)
LOC111845244Ran GTPase activating protein 1b. (629 aa)
card14Caspase recruitment domain family, member 14. (980 aa)
zbtb14Zinc finger and BTB domain containing 14. (503 aa)
Rnf32Ring finger protein 32. (393 aa)
RANGAP1Ran GTPase activating protein 1. (576 aa)
ENSPKIP00000029514Heat shock protein family, member 7 (cardiovascular); Belongs to the small heat shock protein (HSP20) family. (161 aa)
ENSPKIP00000033802Uncharacterized protein. (1007 aa)
trim37Tripartite motif containing 37. (985 aa)
Prdm16Si:ch211-263k4.2. (1177 aa)
sqstm1Sequestosome 1. (421 aa)
LOC111840045Tripartite motif containing 66. (1302 aa)
xrn25'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (989 aa)
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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