(16 nodes) TBP-class protein binding network (Paramormyrops kingsleyae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gtf2a2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (134 aa)
	brf1	BRF1 RNA polymerase III transcription initiation factor subunit b. (680 aa)
	LOC111855423	DR1-associated protein 1 (negative cofactor 2 alpha). (219 aa)
	brf2	BRF2 RNA polymerase III transcription initiation factor subunit. (483 aa)
	taf12	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (165 aa)
	cand1	Cullin-associated and neddylation-dissociated 1. (1230 aa)
	ENSPKIP00000006736	Uncharacterized protein. (45 aa)
	Gtf2b	General transcription factor IIB. (321 aa)
	dr1	Down-regulator of transcription 1. (175 aa)
	LOC111851982	DR1-associated protein 1 (negative cofactor 2 alpha). (331 aa)
	LOC111843609	Cullin-associated and neddylation-dissociated 2 (putative). (1231 aa)
	ENSPKIP00000032842	General transcription factor IIA, 1. (233 aa)
	ENSPKIP00000035862	Transcription initiation factor TFIID subunit. (1853 aa)
	yeats2	YEATS domain containing 2. (1450 aa)
	taf13	TATA-box binding protein associated factor 13. (124 aa)
	Btaf1	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated. (1576 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Btaf1	ENSPKIP00000035862	ENSPKIP00000037792	ENSPKIP00000035862	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	Transcription initiation factor TFIID subunit.	0.633
Btaf1	Gtf2b	ENSPKIP00000037792	ENSPKIP00000017868	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	General transcription factor IIB.	0.684
Btaf1	LOC111851982	ENSPKIP00000037792	ENSPKIP00000024102	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	DR1-associated protein 1 (negative cofactor 2 alpha).	0.850
Btaf1	LOC111855423	ENSPKIP00000037792	ENSPKIP00000001237	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	DR1-associated protein 1 (negative cofactor 2 alpha).	0.850
Btaf1	brf1	ENSPKIP00000037792	ENSPKIP00000000233	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	BRF1 RNA polymerase III transcription initiation factor subunit b.	0.450
Btaf1	dr1	ENSPKIP00000037792	ENSPKIP00000020295	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	Down-regulator of transcription 1.	0.924
Btaf1	taf12	ENSPKIP00000037792	ENSPKIP00000003857	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.624
ENSPKIP00000006736	ENSPKIP00000032842	ENSPKIP00000006736	ENSPKIP00000032842	Uncharacterized protein.	General transcription factor IIA, 1.	0.900
ENSPKIP00000006736	ENSPKIP00000035862	ENSPKIP00000006736	ENSPKIP00000035862	Uncharacterized protein.	Transcription initiation factor TFIID subunit.	0.819
ENSPKIP00000006736	Gtf2b	ENSPKIP00000006736	ENSPKIP00000017868	Uncharacterized protein.	General transcription factor IIB.	0.930
ENSPKIP00000006736	gtf2a2	ENSPKIP00000006736	ENSPKIP00000013931	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.979
ENSPKIP00000006736	taf12	ENSPKIP00000006736	ENSPKIP00000003857	Uncharacterized protein.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.863
ENSPKIP00000006736	taf13	ENSPKIP00000006736	ENSPKIP00000037238	Uncharacterized protein.	TATA-box binding protein associated factor 13.	0.827
ENSPKIP00000032842	ENSPKIP00000006736	ENSPKIP00000032842	ENSPKIP00000006736	General transcription factor IIA, 1.	Uncharacterized protein.	0.900
ENSPKIP00000032842	ENSPKIP00000035862	ENSPKIP00000032842	ENSPKIP00000035862	General transcription factor IIA, 1.	Transcription initiation factor TFIID subunit.	0.819
ENSPKIP00000032842	Gtf2b	ENSPKIP00000032842	ENSPKIP00000017868	General transcription factor IIA, 1.	General transcription factor IIB.	0.930
ENSPKIP00000032842	gtf2a2	ENSPKIP00000032842	ENSPKIP00000013931	General transcription factor IIA, 1.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.979
ENSPKIP00000032842	taf12	ENSPKIP00000032842	ENSPKIP00000003857	General transcription factor IIA, 1.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.863
ENSPKIP00000032842	taf13	ENSPKIP00000032842	ENSPKIP00000037238	General transcription factor IIA, 1.	TATA-box binding protein associated factor 13.	0.827
ENSPKIP00000035862	Btaf1	ENSPKIP00000035862	ENSPKIP00000037792	Transcription initiation factor TFIID subunit.	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	0.633