STRINGSTRING
cdc73 cdc73 ENSPKIP00000040432 ENSPKIP00000040432 smc3 smc3 LOC111841195 LOC111841195 cdh2 cdh2 fancc fancc ENSPKIP00000037840 ENSPKIP00000037840 ENSPKIP00000037818 ENSPKIP00000037818 Mcph1 Mcph1 ENSPKIP00000035606 ENSPKIP00000035606 mettl3 mettl3 trim8 trim8 FAXC-2 FAXC-2 Lig4 Lig4 bcl9 bcl9 HESX1 HESX1 Prdm14 Prdm14 sall4 sall4 ENSPKIP00000023221 ENSPKIP00000023221 dis3l2 dis3l2 LOC111851956 LOC111851956 LOC111838216 LOC111838216 lin28a lin28a rif1 rif1 MED14 MED14 CDH2 CDH2 ENSPKIP00000017038 ENSPKIP00000017038 rtf1 rtf1 tal1 tal1 LOC111857573 LOC111857573 vps72 vps72 zhx2 zhx2 piwil2 piwil2 pcm1 pcm1 fezf2 fezf2 FAXC FAXC ctr9 ctr9 mettl14 mettl14 ENSPKIP00000001441 ENSPKIP00000001441 EIF4ENIF1 EIF4ENIF1 LSM1 LSM1 ENSPKIP00000000242 ENSPKIP00000000242
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (529 aa)
ENSPKIP00000040432RING-type domain-containing protein. (210 aa)
smc3Structural maintenance of chromosomes protein. (1217 aa)
LOC111841195Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (191 aa)
cdh2Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins. (904 aa)
fanccFA complementation group C. (623 aa)
ENSPKIP00000037840RING-type domain-containing protein. (356 aa)
ENSPKIP00000037818RING-type domain-containing protein. (359 aa)
Mcph1Microcephalin 1. (889 aa)
ENSPKIP00000035606BHLH domain-containing protein. (158 aa)
mettl3Methyltransferase like 3; Belongs to the MT-A70-like family. (589 aa)
trim8Tripartite motif containing 8. (569 aa)
FAXC-2Failed axon connections homolog, metaxin like GST domain containing a. (405 aa)
Lig4DNA ligase. (921 aa)
bcl9BCL9 transcription coactivator. (1565 aa)
HESX1HESX homeobox 1. (161 aa)
Prdm14PR domain containing 14. (573 aa)
sall4Spalt-like transcription factor 4. (1066 aa)
ENSPKIP00000023221Nanos-type domain-containing protein; Belongs to the nanos family. (147 aa)
dis3l2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (1060 aa)
LOC111851956Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (191 aa)
LOC111838216Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1406 aa)
lin28aLin-28 homolog A (C. elegans). (196 aa)
rif1Replication timing regulatory factor 1. (2285 aa)
MED14Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1374 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (1163 aa)
ENSPKIP00000017038Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (204 aa)
rtf1RTF1 homolog, Paf1/RNA polymerase II complex component. (678 aa)
tal1T-cell acute lymphocytic leukemia 1. (348 aa)
LOC111857573U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (134 aa)
vps72Vacuolar protein sorting 72 homolog a. (369 aa)
zhx2Zinc fingers and homeoboxes 2a. (807 aa)
piwil2Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family. (1062 aa)
pcm1Pericentriolar material 1. (1941 aa)
fezf2FEZ family zinc finger 2. (433 aa)
FAXCFailed axon connections homolog, metaxin like GST domain containing b. (405 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1206 aa)
mettl14Methyltransferase like 14; Belongs to the MT-A70-like family. (455 aa)
ENSPKIP00000001441RING-type domain-containing protein. (495 aa)
EIF4ENIF1Eukaryotic translation initiation factor 4E nuclear import factor 1. (947 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (154 aa)
ENSPKIP00000000242FA complementation group D2. (1308 aa)
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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