(65 nodes) Cytosolic ribosome network (Paramormyrops kingsleyae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL37A	Ribosomal protein L37a. (68 aa)
	LOC111850474	Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (188 aa)
	dhx29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1366 aa)
	LOC111844452	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	LOC111855903	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (209 aa)
	rpl17	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (184 aa)
	Rpl11	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (198 aa)
	RPL11	Ribosomal_L5_C domain-containing protein. (115 aa)
	ENSPKIP00000007310	Uncharacterized protein. (283 aa)
	ENSPKIP00000007694	Uncharacterized protein. (59 aa)
	rpl14	Ribosomal protein L14. (142 aa)
	rpl35	Ribosomal protein L35. (123 aa)
	LOC111842267	Ribosomal_L16 domain-containing protein. (215 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (66 aa)
	LOC111860617	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (129 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	rpl12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (202 aa)
	RPL3L	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (419 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (278 aa)
	rpl6	Ribosomal protein L6. (264 aa)
	ENSPKIP00000014517	Ribosomal protein S4 X-linked. (359 aa)
	rps21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (81 aa)
	APOD	Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family. (243 aa)
	mrpl1	Mitochondrial ribosomal protein L1. (331 aa)
	rplp1	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (111 aa)
	rpl37	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	ENSPKIP00000015485	40S ribosomal protein S27. (76 aa)
	LOC111860719	Ribosomal protein L26. (145 aa)
	LOC111853115	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	LOC111856962	Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
	RPL5	Ribosomal protein L5. (292 aa)
	ENSPKIP00000021507	Ribosomal_L7Ae domain-containing protein. (56 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	rpl10	Ribosomal protein L10. (215 aa)
	rpsa	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (309 aa)
	RPS26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	rpl3	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (406 aa)
	LOC111843541	40S ribosomal protein S27. (115 aa)
	ENSPKIP00000024910	Uncharacterized protein. (116 aa)
	ENSPKIP00000025042	Ribosomal protein S28. (53 aa)
	LOC111851430	Ubiquitin-like domain-containing protein. (77 aa)
	ENSPKIP00000027702	40S ribosomal protein S27. (83 aa)
	LOC111837806	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	zcchc17	Zinc finger, CCHC domain containing 17. (249 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	rpl38	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	Rps9	Ribosomal_S4 domain-containing protein. (79 aa)
	eif2d	Eukaryotic translation initiation factor 2D. (592 aa)
	rpl23a	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (155 aa)
	RPL27A	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	Rpl21	Ribosomal protein L21. (163 aa)
	LOC111852108	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	LOC111840924	40S ribosomal protein S27. (84 aa)
	Eif2a	Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (601 aa)
	Mrps11	Uncharacterized protein. (220 aa)
	rpl28	Ribosomal protein L28. (137 aa)
	rpl7l1	Ribosomal protein L7-like 1. (248 aa)
	rpl4	Ribosomal protein L4. (404 aa)
	ENSPKIP00000038236	Ribosomal protein L5b. (294 aa)
	rpl30	Ribosomal protein L30. (116 aa)
	RPL27A-2	Ribosomal protein L27a. (118 aa)
	rps3a	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (267 aa)
	ENSPKIP00000040747	Uncharacterized protein. (355 aa)
	rpl7	Ribosomal protein L7. (246 aa)
	LOC111847975	Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (119 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPKIP00000007310	ENSPKIP00000007694	ENSPKIP00000007310	ENSPKIP00000007694	Uncharacterized protein.	Uncharacterized protein.	0.994
ENSPKIP00000007310	ENSPKIP00000014517	ENSPKIP00000007310	ENSPKIP00000014517	Uncharacterized protein.	Ribosomal protein S4 X-linked.	0.980
ENSPKIP00000007310	ENSPKIP00000015485	ENSPKIP00000007310	ENSPKIP00000015485	Uncharacterized protein.	40S ribosomal protein S27.	0.942
ENSPKIP00000007310	ENSPKIP00000021507	ENSPKIP00000007310	ENSPKIP00000021507	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.952
ENSPKIP00000007310	ENSPKIP00000024910	ENSPKIP00000007310	ENSPKIP00000024910	Uncharacterized protein.	Uncharacterized protein.	0.942
ENSPKIP00000007310	ENSPKIP00000025042	ENSPKIP00000007310	ENSPKIP00000025042	Uncharacterized protein.	Ribosomal protein S28.	0.996
ENSPKIP00000007310	ENSPKIP00000027702	ENSPKIP00000007310	ENSPKIP00000027702	Uncharacterized protein.	40S ribosomal protein S27.	0.937
ENSPKIP00000007310	ENSPKIP00000038236	ENSPKIP00000007310	ENSPKIP00000038236	Uncharacterized protein.	Ribosomal protein L5b.	0.953
ENSPKIP00000007310	ENSPKIP00000040747	ENSPKIP00000007310	ENSPKIP00000040747	Uncharacterized protein.	Uncharacterized protein.	0.942
ENSPKIP00000007310	Eif2a	ENSPKIP00000007310	ENSPKIP00000035794	Uncharacterized protein.	Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner.	0.409
ENSPKIP00000007310	LOC111837806	ENSPKIP00000007310	ENSPKIP00000027745	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.953
ENSPKIP00000007310	LOC111840924	ENSPKIP00000007310	ENSPKIP00000035607	Uncharacterized protein.	40S ribosomal protein S27.	0.942
ENSPKIP00000007310	LOC111842267	ENSPKIP00000007310	ENSPKIP00000009255	Uncharacterized protein.	Ribosomal_L16 domain-containing protein.	0.946
ENSPKIP00000007310	LOC111843541	ENSPKIP00000007310	ENSPKIP00000024570	Uncharacterized protein.	40S ribosomal protein S27.	0.942
ENSPKIP00000007310	LOC111844452	ENSPKIP00000007310	ENSPKIP00000003892	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSPKIP00000007310	LOC111847975	ENSPKIP00000007310	ENSPKIP00000041756	Uncharacterized protein.	Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.932
ENSPKIP00000007310	LOC111851430	ENSPKIP00000007310	ENSPKIP00000027611	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.978
ENSPKIP00000007310	LOC111852108	ENSPKIP00000007310	ENSPKIP00000034824	Uncharacterized protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.980
ENSPKIP00000007310	LOC111855903	ENSPKIP00000007310	ENSPKIP00000004492	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.953
ENSPKIP00000007310	LOC111856962	ENSPKIP00000007310	ENSPKIP00000018974	Uncharacterized protein.	Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.932