(20 nodes) Endodermal cell differentiation network (Paramormyrops kingsleyae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cdc73	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (529 aa)
	ENSPKIP00000000013	Vitronectin b. (428 aa)
	apela	Apelin receptor early endogenous ligand. (54 aa)
	hmga2	High mobility group AT-hook 2. (107 aa)
	ctr9	CTR9 homolog, Paf1/RNA polymerase II complex component. (1206 aa)
	LOC111839187	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family. (361 aa)
	LOC111851886	Matrix metallopeptidase 15b. (645 aa)
	setd2	SET domain containing 2, histone lysine methyltransferase. (2806 aa)
	ENSPKIP00000014547	Uncharacterized protein. (108 aa)
	rtf1	RTF1 homolog, Paf1/RNA polymerase II complex component. (678 aa)
	MMP15	Matrix metallopeptidase 15. (677 aa)
	lamb3	Uncharacterized protein. (1159 aa)
	LOC111841358	Mix paired-like homeobox. (302 aa)
	ENSPKIP00000024300	Uncharacterized protein. (2466 aa)
	LOC111854546	Matrix metallopeptidase 14b (membrane-inserted). (615 aa)
	ENSPKIP00000030024	Vitronectin a. (508 aa)
	LOC111858764	Nuclear receptor subfamily 0, group B, member 1. (261 aa)
	LOC111843681	NR LBD domain-containing protein. (264 aa)
	ENSPKIP00000040751	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (352 aa)
	ENSPKIP00000040967	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (354 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPKIP00000000013	ENSPKIP00000024300	ENSPKIP00000000013	ENSPKIP00000024300	Vitronectin b.	Uncharacterized protein.	0.536
ENSPKIP00000024300	ENSPKIP00000000013	ENSPKIP00000024300	ENSPKIP00000000013	Uncharacterized protein.	Vitronectin b.	0.536
ENSPKIP00000024300	ENSPKIP00000030024	ENSPKIP00000024300	ENSPKIP00000030024	Uncharacterized protein.	Vitronectin a.	0.536
ENSPKIP00000030024	ENSPKIP00000024300	ENSPKIP00000030024	ENSPKIP00000024300	Vitronectin a.	Uncharacterized protein.	0.536
ENSPKIP00000040751	apela	ENSPKIP00000040751	ENSPKIP00000001570	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Apelin receptor early endogenous ligand.	0.844
ENSPKIP00000040967	apela	ENSPKIP00000040967	ENSPKIP00000001570	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Apelin receptor early endogenous ligand.	0.796
LOC111839187	apela	ENSPKIP00000006825	ENSPKIP00000001570	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family.	Apelin receptor early endogenous ligand.	0.796
apela	ENSPKIP00000040751	ENSPKIP00000001570	ENSPKIP00000040751	Apelin receptor early endogenous ligand.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.844
apela	ENSPKIP00000040967	ENSPKIP00000001570	ENSPKIP00000040967	Apelin receptor early endogenous ligand.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.796
apela	LOC111839187	ENSPKIP00000001570	ENSPKIP00000006825	Apelin receptor early endogenous ligand.	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family.	0.796
cdc73	ctr9	ENSPKIP00000041746	ENSPKIP00000006587	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	CTR9 homolog, Paf1/RNA polymerase II complex component.	0.999
cdc73	rtf1	ENSPKIP00000041746	ENSPKIP00000016124	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	RTF1 homolog, Paf1/RNA polymerase II complex component.	0.997
cdc73	setd2	ENSPKIP00000041746	ENSPKIP00000011223	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	SET domain containing 2, histone lysine methyltransferase.	0.663
ctr9	cdc73	ENSPKIP00000006587	ENSPKIP00000041746	CTR9 homolog, Paf1/RNA polymerase II complex component.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.999
ctr9	rtf1	ENSPKIP00000006587	ENSPKIP00000016124	CTR9 homolog, Paf1/RNA polymerase II complex component.	RTF1 homolog, Paf1/RNA polymerase II complex component.	0.998
ctr9	setd2	ENSPKIP00000006587	ENSPKIP00000011223	CTR9 homolog, Paf1/RNA polymerase II complex component.	SET domain containing 2, histone lysine methyltransferase.	0.729
rtf1	cdc73	ENSPKIP00000016124	ENSPKIP00000041746	RTF1 homolog, Paf1/RNA polymerase II complex component.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.997
rtf1	ctr9	ENSPKIP00000016124	ENSPKIP00000006587	RTF1 homolog, Paf1/RNA polymerase II complex component.	CTR9 homolog, Paf1/RNA polymerase II complex component.	0.998
rtf1	setd2	ENSPKIP00000016124	ENSPKIP00000011223	RTF1 homolog, Paf1/RNA polymerase II complex component.	SET domain containing 2, histone lysine methyltransferase.	0.730
setd2	cdc73	ENSPKIP00000011223	ENSPKIP00000041746	SET domain containing 2, histone lysine methyltransferase.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.663