16 items (Paramormyrops kingsleyae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CIRBP	RNA binding motif protein 3. (148 aa)
	prpf19	Pre-mRNA processing factor 19. (505 aa)
	sf3b4	Splicing factor 3b, subunit 4. (399 aa)
	rbmx	RNA binding motif protein X-linked. (381 aa)
	ncl	Nucleolin. (745 aa)
	HMX2	H6 family homeobox 2. (267 aa)
	dazap1	DAZ associated protein 1. (437 aa)
	LOC111845381	RRM domain-containing protein. (326 aa)
	tra2b	Transformer 2 beta homolog. (300 aa)
	cirbp	Cold inducible RNA binding protein a. (190 aa)
	LOC111853312	Cugbp, Elav-like family member 3b. (457 aa)
	tra2a	Transformer 2 alpha homolog. (291 aa)
	snw1	SNW domain containing 1. (536 aa)
	nup98	Nucleoporin 98. (1852 aa)
	Celf4	CUGBP, Elav-like family member 4. (502 aa)
	LOC111835034	RNA binding motif protein X-linked. (375 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CIRBP	LOC111845381	ENSPKIP00000009277	ENSPKIP00000024737	RNA binding motif protein 3.	RRM domain-containing protein.	0.521
CIRBP	ncl	ENSPKIP00000009277	ENSPKIP00000016178	RNA binding motif protein 3.	Nucleolin.	0.432
CIRBP	prpf19	ENSPKIP00000009277	ENSPKIP00000001431	RNA binding motif protein 3.	Pre-mRNA processing factor 19.	0.479
CIRBP	sf3b4	ENSPKIP00000009277	ENSPKIP00000002984	RNA binding motif protein 3.	Splicing factor 3b, subunit 4.	0.503
CIRBP	snw1	ENSPKIP00000009277	ENSPKIP00000036433	RNA binding motif protein 3.	SNW domain containing 1.	0.442
CIRBP	tra2a	ENSPKIP00000009277	ENSPKIP00000032037	RNA binding motif protein 3.	Transformer 2 alpha homolog.	0.518
CIRBP	tra2b	ENSPKIP00000009277	ENSPKIP00000027997	RNA binding motif protein 3.	Transformer 2 beta homolog.	0.521
LOC111835034	LOC111845381	ENSPKIP00000040808	ENSPKIP00000024737	RNA binding motif protein X-linked.	RRM domain-containing protein.	0.593
LOC111835034	ncl	ENSPKIP00000040808	ENSPKIP00000016178	RNA binding motif protein X-linked.	Nucleolin.	0.609
LOC111835034	prpf19	ENSPKIP00000040808	ENSPKIP00000001431	RNA binding motif protein X-linked.	Pre-mRNA processing factor 19.	0.537
LOC111835034	sf3b4	ENSPKIP00000040808	ENSPKIP00000002984	RNA binding motif protein X-linked.	Splicing factor 3b, subunit 4.	0.512
LOC111835034	snw1	ENSPKIP00000040808	ENSPKIP00000036433	RNA binding motif protein X-linked.	SNW domain containing 1.	0.442
LOC111835034	tra2a	ENSPKIP00000040808	ENSPKIP00000032037	RNA binding motif protein X-linked.	Transformer 2 alpha homolog.	0.592
LOC111835034	tra2b	ENSPKIP00000040808	ENSPKIP00000027997	RNA binding motif protein X-linked.	Transformer 2 beta homolog.	0.600
LOC111845381	CIRBP	ENSPKIP00000024737	ENSPKIP00000009277	RRM domain-containing protein.	RNA binding motif protein 3.	0.521
LOC111845381	LOC111835034	ENSPKIP00000024737	ENSPKIP00000040808	RRM domain-containing protein.	RNA binding motif protein X-linked.	0.593
LOC111845381	cirbp	ENSPKIP00000024737	ENSPKIP00000029262	RRM domain-containing protein.	Cold inducible RNA binding protein a.	0.526
LOC111845381	ncl	ENSPKIP00000024737	ENSPKIP00000016178	RRM domain-containing protein.	Nucleolin.	0.425
LOC111845381	prpf19	ENSPKIP00000024737	ENSPKIP00000001431	RRM domain-containing protein.	Pre-mRNA processing factor 19.	0.479
LOC111845381	rbmx	ENSPKIP00000024737	ENSPKIP00000010050	RRM domain-containing protein.	RNA binding motif protein X-linked.	0.589