(70 nodes) Cytosolic ribosome network (Paramormyrops kingsleyae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpl36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (126 aa)
	LOC111837806	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	ENSPKIP00000027923	Uncharacterized protein. (127 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	RPL24	Ribosomal protein L24. (157 aa)
	RPS20	Ribosomal protein S20. (135 aa)
	zcchc17	Zinc finger, CCHC domain containing 17. (249 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	RPS25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (124 aa)
	RPL27A	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	Rpl21	Ribosomal protein L21. (163 aa)
	RPL36AL	Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family. (126 aa)
	LOC111852108	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	rpl35a	Ribosomal protein L35a. (157 aa)
	rpl28	Ribosomal protein L28. (137 aa)
	RPS13	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	rpl4	Ribosomal protein L4. (404 aa)
	rpl30	Ribosomal protein L30. (116 aa)
	RPL27A-2	Ribosomal protein L27a. (118 aa)
	rps3a	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (267 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	LOC111860617	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (129 aa)
	RPL7A	Ribosomal protein L7a. (197 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (66 aa)
	rps19	Ribosomal protein S19. (145 aa)
	LOC111842267	Ribosomal_L16 domain-containing protein. (215 aa)
	rpl35	Ribosomal protein L35. (123 aa)
	rps13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	ENSPKIP00000007694	Uncharacterized protein. (59 aa)
	ENSPKIP00000007310	Uncharacterized protein. (283 aa)
	RPS17	Ribosomal protein S17. (134 aa)
	LOC111835138	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	LOC111855903	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (209 aa)
	mcts1	Malignant T-cell-amplified sequence. (186 aa)
	LOC111844452	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	ENSPKIP00000003814	Uncharacterized protein. (84 aa)
	dhx29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1366 aa)
	ENSPKIP00000003048	Ribosomal_L7Ae domain-containing protein. (271 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	LOC111850474	Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (188 aa)
	rps11	Si:dkey-159f12.2; Belongs to the universal ribosomal protein uS17 family. (159 aa)
	rpl31	Ribosomal protein L31. (125 aa)
	rplp1	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (111 aa)
	APOD	Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family. (243 aa)
	ENSPKIP00000024910	Uncharacterized protein. (116 aa)
	ENSPKIP00000025042	Ribosomal protein S28. (53 aa)
	ENSPKIP00000025393	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (72 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (131 aa)
	ENSPKIP00000027702	40S ribosomal protein S27. (83 aa)
	LOC111845655	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	rps15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (179 aa)
	RPS26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	LOC111847656	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	rpsa	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (309 aa)
	ENSPKIP00000022917	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (93 aa)
	rpl10	Ribosomal protein L10. (215 aa)
	ENSPKIP00000021507	Ribosomal_L7Ae domain-containing protein. (56 aa)
	Rpl32	Uncharacterized protein. (156 aa)
	LOC111841881	TRASH domain-containing protein. (186 aa)
	RPL9	Ribosomal protein L9. (242 aa)
	LOC111857610	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	LOC111853115	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	Rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (263 aa)
	LOC111860719	Ribosomal protein L26. (145 aa)
	LOC111847002	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	LOC111843378	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	rpl13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (223 aa)
	rpl6	Ribosomal protein L6. (264 aa)
	rpl34	Ribosomal protein L34. (135 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (278 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPKIP00000003048	ENSPKIP00000003814	ENSPKIP00000003048	ENSPKIP00000003814	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.941
ENSPKIP00000003048	ENSPKIP00000007310	ENSPKIP00000003048	ENSPKIP00000007310	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.969
ENSPKIP00000003048	ENSPKIP00000007694	ENSPKIP00000003048	ENSPKIP00000007694	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.986
ENSPKIP00000003048	ENSPKIP00000021507	ENSPKIP00000003048	ENSPKIP00000021507	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.976
ENSPKIP00000003048	ENSPKIP00000022917	ENSPKIP00000003048	ENSPKIP00000022917	Ribosomal_L7Ae domain-containing protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.968
ENSPKIP00000003048	ENSPKIP00000024910	ENSPKIP00000003048	ENSPKIP00000024910	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.972
ENSPKIP00000003048	ENSPKIP00000025042	ENSPKIP00000003048	ENSPKIP00000025042	Ribosomal_L7Ae domain-containing protein.	Ribosomal protein S28.	0.990
ENSPKIP00000003048	ENSPKIP00000025393	ENSPKIP00000003048	ENSPKIP00000025393	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.941
ENSPKIP00000003048	ENSPKIP00000027702	ENSPKIP00000003048	ENSPKIP00000027702	Ribosomal_L7Ae domain-containing protein.	40S ribosomal protein S27.	0.912
ENSPKIP00000003048	ENSPKIP00000027923	ENSPKIP00000003048	ENSPKIP00000027923	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.974
ENSPKIP00000003048	LOC111835138	ENSPKIP00000003048	ENSPKIP00000007018	Ribosomal_L7Ae domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.998
ENSPKIP00000003048	LOC111837806	ENSPKIP00000003048	ENSPKIP00000027745	Ribosomal_L7Ae domain-containing protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.976
ENSPKIP00000003048	LOC111841881	ENSPKIP00000003048	ENSPKIP00000021063	Ribosomal_L7Ae domain-containing protein.	TRASH domain-containing protein.	0.975
ENSPKIP00000003048	LOC111842267	ENSPKIP00000003048	ENSPKIP00000009255	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L16 domain-containing protein.	0.972
ENSPKIP00000003048	LOC111843378	ENSPKIP00000003048	ENSPKIP00000015011	Ribosomal_L7Ae domain-containing protein.	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.967
ENSPKIP00000003048	LOC111844452	ENSPKIP00000003048	ENSPKIP00000003892	Ribosomal_L7Ae domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.998
ENSPKIP00000003048	LOC111845655	ENSPKIP00000003048	ENSPKIP00000000188	Ribosomal_L7Ae domain-containing protein.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.965
ENSPKIP00000003048	LOC111847002	ENSPKIP00000003048	ENSPKIP00000015321	Ribosomal_L7Ae domain-containing protein.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.965
ENSPKIP00000003048	LOC111847656	ENSPKIP00000003048	ENSPKIP00000023481	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.967
ENSPKIP00000003048	LOC111852108	ENSPKIP00000003048	ENSPKIP00000034824	Ribosomal_L7Ae domain-containing protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.972