(32 nodes) Cytosolic small ribosomal subunit network (Paramormyrops kingsleyae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111857610	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	ENSPKIP00000007694	Uncharacterized protein. (59 aa)
	ENSPKIP00000007310	Uncharacterized protein. (283 aa)
	RPS17	Ribosomal protein S17. (134 aa)
	LOC111835138	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	mcts1	Malignant T-cell-amplified sequence. (186 aa)
	LOC111844452	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	dhx29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1366 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	rps11	Si:dkey-159f12.2; Belongs to the universal ribosomal protein uS17 family. (159 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	RPS25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (124 aa)
	LOC111852108	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	RPS13	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	rps3a	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (267 aa)
	rps13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	rps19	Ribosomal protein S19. (145 aa)
	LOC111860617	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (129 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (278 aa)
	LOC111843378	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	Rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (263 aa)
	LOC111853115	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	ENSPKIP00000022917	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (93 aa)
	rpsa	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (309 aa)
	LOC111847656	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	RPS26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	rps15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (179 aa)
	ENSPKIP00000025042	Ribosomal protein S28. (53 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (131 aa)
	ENSPKIP00000027702	40S ribosomal protein S27. (83 aa)
	RPS20	Ribosomal protein S20. (135 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPKIP00000007310	ENSPKIP00000007694	ENSPKIP00000007310	ENSPKIP00000007694	Uncharacterized protein.	Uncharacterized protein.	0.994
ENSPKIP00000007310	ENSPKIP00000022917	ENSPKIP00000007310	ENSPKIP00000022917	Uncharacterized protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.979
ENSPKIP00000007310	ENSPKIP00000025042	ENSPKIP00000007310	ENSPKIP00000025042	Uncharacterized protein.	Ribosomal protein S28.	0.996
ENSPKIP00000007310	ENSPKIP00000027702	ENSPKIP00000007310	ENSPKIP00000027702	Uncharacterized protein.	40S ribosomal protein S27.	0.937
ENSPKIP00000007310	LOC111835138	ENSPKIP00000007310	ENSPKIP00000007018	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSPKIP00000007310	LOC111843378	ENSPKIP00000007310	ENSPKIP00000015011	Uncharacterized protein.	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.980
ENSPKIP00000007310	LOC111844452	ENSPKIP00000007310	ENSPKIP00000003892	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSPKIP00000007310	LOC111847656	ENSPKIP00000007310	ENSPKIP00000023481	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.980
ENSPKIP00000007310	LOC111852108	ENSPKIP00000007310	ENSPKIP00000034824	Uncharacterized protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.980
ENSPKIP00000007310	LOC111857610	ENSPKIP00000007310	ENSPKIP00000018430	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.980
ENSPKIP00000007310	LOC111860617	ENSPKIP00000007310	ENSPKIP00000010538	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.980
ENSPKIP00000007310	RPS13	ENSPKIP00000007310	ENSPKIP00000037202	Uncharacterized protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.978
ENSPKIP00000007310	RPS17	ENSPKIP00000007310	ENSPKIP00000007206	Uncharacterized protein.	Ribosomal protein S17.	0.995
ENSPKIP00000007310	RPS20	ENSPKIP00000007310	ENSPKIP00000029138	Uncharacterized protein.	Ribosomal protein S20.	0.995
ENSPKIP00000007310	RPS25	ENSPKIP00000007310	ENSPKIP00000031241	Uncharacterized protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.979
ENSPKIP00000007310	RPS26	ENSPKIP00000007310	ENSPKIP00000024135	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.980
ENSPKIP00000007310	Rps7	ENSPKIP00000007310	ENSPKIP00000017025	Uncharacterized protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.995
ENSPKIP00000007310	dhx29	ENSPKIP00000007310	ENSPKIP00000003058	Uncharacterized protein.	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	0.567
ENSPKIP00000007310	mcts1	ENSPKIP00000007310	ENSPKIP00000004365	Uncharacterized protein.	Malignant T-cell-amplified sequence.	0.564
ENSPKIP00000007310	rps11	ENSPKIP00000007310	ENSPKIP00000001794	Uncharacterized protein.	Si:dkey-159f12.2; Belongs to the universal ribosomal protein uS17 family.	0.995