(12 nodes) Interphotoreceptor matrix network (Paramormyrops kingsleyae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Vcan	Link domain-containing protein. (1302 aa)
	ENSPKIP00000018037	EGF-like domain-containing protein. (314 aa)
	LOC111838257	ULP_PROTEASE domain-containing protein. (921 aa)
	ENSPKIP00000003269	Interphotoreceptor matrix proteoglycan 2b. (287 aa)
	IMPG1	Interphotoreceptor matrix proteoglycan 1. (961 aa)
	ENSPKIP00000034649	C-type lectin domain-containing protein. (105 aa)
	LOC111850268	SUMO specific peptidase 7. (1029 aa)
	ENSPKIP00000040504	Uncharacterized protein. (122 aa)
	ENSPKIP00000040483	Interphotoreceptor matrix proteoglycan 1a. (222 aa)
	ENSPKIP00000038507	Retinol binding protein 3. (598 aa)
	LOC111856602	Retinol binding protein 4, like; Belongs to the calycin superfamily. Lipocalin family. (197 aa)
	ENSPKIP00000034681	Uncharacterized protein. (351 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPKIP00000038507	ENSPKIP00000040483	ENSPKIP00000038507	ENSPKIP00000040483	Retinol binding protein 3.	Interphotoreceptor matrix proteoglycan 1a.	0.470
ENSPKIP00000038507	ENSPKIP00000040504	ENSPKIP00000038507	ENSPKIP00000040504	Retinol binding protein 3.	Uncharacterized protein.	0.470
ENSPKIP00000038507	IMPG1	ENSPKIP00000038507	ENSPKIP00000002291	Retinol binding protein 3.	Interphotoreceptor matrix proteoglycan 1.	0.470
ENSPKIP00000040483	ENSPKIP00000038507	ENSPKIP00000040483	ENSPKIP00000038507	Interphotoreceptor matrix proteoglycan 1a.	Retinol binding protein 3.	0.470
ENSPKIP00000040504	ENSPKIP00000038507	ENSPKIP00000040504	ENSPKIP00000038507	Uncharacterized protein.	Retinol binding protein 3.	0.470
IMPG1	ENSPKIP00000038507	ENSPKIP00000002291	ENSPKIP00000038507	Interphotoreceptor matrix proteoglycan 1.	Retinol binding protein 3.	0.470