STRINGSTRING
leng9 leng9 ENSPKIP00000000242 ENSPKIP00000000242 ENSPKIP00000001086 ENSPKIP00000001086 Mlh1 Mlh1 Xrcc1 Xrcc1 ENSPKIP00000009982 ENSPKIP00000009982 LOC111842420 LOC111842420 nhej1 nhej1 Msh4 Msh4 ercc3 ercc3 msh6 msh6 mlh3 mlh3 Bivm Bivm ENSPKIP00000016827 ENSPKIP00000016827 xrcc4 xrcc4 ercc1 ercc1 ENSPKIP00000025031 ENSPKIP00000025031 pms2 pms2 ENSPKIP00000026053 ENSPKIP00000026053 msh2 msh2 ercc5 ercc5 Lig4 Lig4 Atm Atm ENSPKIP00000032643 ENSPKIP00000032643 PHF21A PHF21A palb2 palb2 xpc xpc msh3 msh3 Kdm1a Kdm1a ENSPKIP00000035840 ENSPKIP00000035840 fanci fanci pms1 pms1 ENSPKIP00000036487 ENSPKIP00000036487 tp53bp1 tp53bp1 ercc4 ercc4 ercc8 ercc8 Xpa Xpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
leng9C3H1-type domain-containing protein. (598 aa)
ENSPKIP00000000242FA complementation group D2. (1308 aa)
ENSPKIP00000001086Zinc finger, SWIM-type containing 7. (151 aa)
Mlh1MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (776 aa)
Xrcc1X-ray repair complementing defective repair in Chinese hamster cells 1. (617 aa)
ENSPKIP00000009982Uncharacterized protein. (186 aa)
LOC111842420DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae). (640 aa)
nhej1Nonhomologous end-joining factor 1. (334 aa)
Msh4DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (867 aa)
ercc3Excision repair cross-complementation group 3. (786 aa)
msh6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1374 aa)
mlh3MutL homolog 3 (E. coli). (1346 aa)
BivmBasic, immunoglobulin-like variable motif containing. (497 aa)
ENSPKIP00000016827PHD finger protein 21A. (760 aa)
xrcc4X-ray repair complementing defective repair in Chinese hamster cells 4. (344 aa)
ercc1Excision repair cross-complementation group 1. (325 aa)
ENSPKIP00000025031Uncharacterized protein. (171 aa)
pms2PMS1 homolog 2, mismatch repair system component. (855 aa)
ENSPKIP00000026053SWIM-type zinc finger 7 associated protein 1. (253 aa)
msh2MutS homolog 2 (E. coli); Component of the post-replicative DNA mismatch repair system (MMR). (786 aa)
ercc5Excision repair cross-complementation group 5. (1172 aa)
Lig4DNA ligase. (921 aa)
AtmNon-specific serine/threonine protein kinase. (3029 aa)
ENSPKIP00000032643Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (3873 aa)
PHF21APHD finger protein 21Aa. (703 aa)
palb2PALB2_WD40 domain-containing protein. (1433 aa)
xpcXeroderma pigmentosum, complementation group C. (870 aa)
msh3DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1092 aa)
Kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (851 aa)
ENSPKIP00000035840Uncharacterized protein. (553 aa)
fanciFA complementation group I. (1324 aa)
pms1PMS1 homolog 1, mismatch repair system component. (874 aa)
ENSPKIP00000036487Zgc:110224. (404 aa)
tp53bp1Tumor protein p53 binding protein, 1. (1913 aa)
ercc4Excision repair cross-complementation group 4. (893 aa)
ercc8Excision repair cross-complementation group 8. (400 aa)
XpaXeroderma pigmentosum, complementation group A. (272 aa)
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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