(4 nodes) Nuclear receptor coactivator, CREB-bp-like, interlocking network (Paramormyrops kingsleyae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPKIP00000010184	CREB binding protein a. (2348 aa)
	EP300	E1A binding protein p300. (2557 aa)
	LOC111843207	CREB binding protein b. (2374 aa)
	LOC111845232	Uncharacterized protein. (2683 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPKIP00000010184	EP300	ENSPKIP00000010184	ENSPKIP00000027655	CREB binding protein a.	E1A binding protein p300.	0.940
ENSPKIP00000010184	LOC111845232	ENSPKIP00000010184	ENSPKIP00000018215	CREB binding protein a.	Uncharacterized protein.	0.940
EP300	ENSPKIP00000010184	ENSPKIP00000027655	ENSPKIP00000010184	E1A binding protein p300.	CREB binding protein a.	0.940
EP300	LOC111843207	ENSPKIP00000027655	ENSPKIP00000022792	E1A binding protein p300.	CREB binding protein b.	0.993
EP300	LOC111845232	ENSPKIP00000027655	ENSPKIP00000018215	E1A binding protein p300.	Uncharacterized protein.	0.901
LOC111843207	EP300	ENSPKIP00000022792	ENSPKIP00000027655	CREB binding protein b.	E1A binding protein p300.	0.993
LOC111843207	LOC111845232	ENSPKIP00000022792	ENSPKIP00000018215	CREB binding protein b.	Uncharacterized protein.	0.993
LOC111845232	ENSPKIP00000010184	ENSPKIP00000018215	ENSPKIP00000010184	Uncharacterized protein.	CREB binding protein a.	0.940
LOC111845232	EP300	ENSPKIP00000018215	ENSPKIP00000027655	Uncharacterized protein.	E1A binding protein p300.	0.901
LOC111845232	LOC111843207	ENSPKIP00000018215	ENSPKIP00000022792	Uncharacterized protein.	CREB binding protein b.	0.993