(55 nodes) Zinc finger, RING-type, eukaryotic network (Paramormyrops kingsleyae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rbck1	RanBP-type and C3HC4-type zinc finger containing 1. (533 aa)
	ENSPKIP00000037840	RING-type domain-containing protein. (356 aa)
	ENSPKIP00000037818	RING-type domain-containing protein. (359 aa)
	trim54	Tripartite motif containing 54. (354 aa)
	LOC111857132	Uncharacterized protein. (540 aa)
	ENSPKIP00000035845	Tripartite motif containing 9. (352 aa)
	ENSPKIP00000034763	RING-type domain-containing protein. (86 aa)
	LOC111847300	RING-type domain-containing protein. (233 aa)
	LOC111856458	Uncharacterized protein. (563 aa)
	trim62	Tripartite motif containing 62, tandem duplicate 1. (475 aa)
	LOC111849212	Tripartite motif containing 35-12. (517 aa)
	RNF222	Ring finger protein 222. (217 aa)
	TRIM50	Tripartite motif containing 50. (488 aa)
	LOC111860313	RING-type domain-containing protein. (247 aa)
	ENSPKIP00000026574	RING-type domain-containing protein. (202 aa)
	ENSPKIP00000026254	Uncharacterized protein. (438 aa)
	ENSPKIP00000023526	Si:ch73-335l21.2. (184 aa)
	ENSPKIP00000023399	RING-type domain-containing protein. (282 aa)
	LOC111838948	Uncharacterized protein. (1125 aa)
	LOC111848926	LON peptidase N-terminal domain and ring finger 1. (587 aa)
	LONRF1	LON peptidase N-terminal domain and ring finger 1. (693 aa)
	Rmnd5a	zf-RING_UBOX domain-containing protein. (98 aa)
	Rnf32	Ring finger protein 32. (393 aa)
	trim32	Tripartite motif containing 32. (670 aa)
	ENSPKIP00000021105	Ring finger protein 114. (229 aa)
	LOC111837097	Tripartite motif containing 101. (544 aa)
	ENSPKIP00000019309	RING-type domain-containing protein. (99 aa)
	sh3rf1	SH3 domain containing ring finger 1. (812 aa)
	ENSPKIP00000017985	RING-type domain-containing protein. (267 aa)
	lnx1	Ligand of numb-protein X 1. (734 aa)
	ENSPKIP00000017231	RING-type domain-containing protein. (193 aa)
	LOC111833309	Tripartite motif containing 24. (990 aa)
	LOC111858085	Uncharacterized protein. (436 aa)
	LOC111858109	Bloodthirsty-related gene family, member 12. (558 aa)
	LOC111851344	Uncharacterized protein. (771 aa)
	ENSPKIP00000015510	Uncharacterized protein. (395 aa)
	Trim65	Tripartite motif containing 65. (511 aa)
	TRIM63	Tripartite motif containing 63. (356 aa)
	LOC111840443	Tripartite motif containing 3b. (811 aa)
	LOC111853548	Midline 2. (722 aa)
	lonrf2	Si:ch1073-440b2.1. (774 aa)
	trim45	Tripartite motif containing 45. (592 aa)
	trim23	Tripartite motif containing 23. (579 aa)
	LOC111855588	Midline 1. (668 aa)
	LONRF3	LON peptidase N-terminal domain and ring finger 3. (726 aa)
	ENSPKIP00000001441	RING-type domain-containing protein. (495 aa)
	shprh	SNF2 histone linker PHD RING helicase. (1649 aa)
	LOC111841600	RING-type domain-containing protein. (258 aa)
	trim55	Tripartite motif containing 55a. (467 aa)
	trim2	Tripartite motif containing 2a. (792 aa)
	ENSPKIP00000040432	RING-type domain-containing protein. (210 aa)
	trim36	Tripartite motif containing 36. (769 aa)
	rmnd5b	Required for meiotic nuclear division 5 homolog B. (391 aa)
	ENSPKIP00000015475	RING-type domain-containing protein. (55 aa)
	ENSPKIP00000015447	Uncharacterized protein. (474 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TRIM50	trim23	ENSPKIP00000030051	ENSPKIP00000011100	Tripartite motif containing 50.	Tripartite motif containing 23.	0.445
Trim65	trim23	ENSPKIP00000005347	ENSPKIP00000011100	Tripartite motif containing 65.	Tripartite motif containing 23.	0.461
trim23	TRIM50	ENSPKIP00000011100	ENSPKIP00000030051	Tripartite motif containing 23.	Tripartite motif containing 50.	0.445
trim23	Trim65	ENSPKIP00000011100	ENSPKIP00000005347	Tripartite motif containing 23.	Tripartite motif containing 65.	0.461
trim32	trim62	ENSPKIP00000021166	ENSPKIP00000033574	Tripartite motif containing 32.	Tripartite motif containing 62, tandem duplicate 1.	0.438
trim62	trim32	ENSPKIP00000033574	ENSPKIP00000021166	Tripartite motif containing 62, tandem duplicate 1.	Tripartite motif containing 32.	0.438