(50 nodes) PAS domain superfamily network (Paramormyrops kingsleyae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111853441	Uncharacterized protein. (961 aa)
	LOC111844457	Hypoxia inducible factor 1 subunit alpha. (753 aa)
	LOC111846750	Phosphodiesterase. (849 aa)
	LOC111859839	Uncharacterized protein. (857 aa)
	ENSPKIP00000002031	Potassium voltage-gated channel, subfamily H (eag-related), member 4a. (1219 aa)
	LOC111844456	Potassium voltage-gated channel subfamily H member 5. (1050 aa)
	pde8b	Phosphodiesterase. (896 aa)
	arnt2	Aryl-hydrocarbon receptor nuclear translocator 2. (737 aa)
	ENSPKIP00000038021	Uncharacterized protein. (1003 aa)
	ncoa1	Nuclear receptor coactivator 1. (1357 aa)
	pask	PAS domain containing serine/threonine kinase. (1228 aa)
	ENSPKIP00000035539	Uncharacterized protein. (917 aa)
	sim1	SIM bHLH transcription factor 1a. (732 aa)
	per1	Period circadian clock 1b. (1395 aa)
	LOC111832977	Aryl hydrocarbon receptor nuclear translocator like. (693 aa)
	LOC111853315	Aryl hydrocarbon receptor nuclear translocator. (779 aa)
	npas1	Neuronal PAS domain protein 1. (772 aa)
	kcnh8	Potassium voltage-gated channel, subfamily H (eag-related), member 8. (1022 aa)
	PER2	Period circadian regulator 2. (1433 aa)
	KCNH2	Potassium voltage-gated channel subfamily H member 2. (1190 aa)
	LOC111845389	Aryl hydrocarbon receptor 1b. (947 aa)
	LOC111845405	Aryl hydrocarbon receptor 2. (999 aa)
	LOC111839067	Aryl hydrocarbon receptor 1a. (821 aa)
	ENSPKIP00000023952	Potassium voltage-gated channel, subfamily H (eag-related), member 2a. (1076 aa)
	LOC111844078	Hypoxia inducible factor 1 subunit alpha, like. (632 aa)
	ncoa2	Uncharacterized protein. (1371 aa)
	ENSPKIP00000023000	Uncharacterized protein. (352 aa)
	ENSPKIP00000022956	Uncharacterized protein. (876 aa)
	LOC111847548	Period circadian clock 2. (1434 aa)
	ENSPKIP00000021736	Uncharacterized protein. (1152 aa)
	ENSPKIP00000018111	Uncharacterized protein. (462 aa)
	Clock	Clock circadian regulator a. (874 aa)
	ENSPKIP00000001068	Phosphodiesterase. (771 aa)
	NPAS3	Neuronal PAS domain protein 3. (867 aa)
	LOC111855872	Uncharacterized protein. (736 aa)
	LOC111834002	Aryl-hydrocarbon receptor repressor b. (628 aa)
	LOC111854986	Uncharacterized protein. (667 aa)
	KCNH4	Potassium voltage-gated channel subfamily H member 4. (1189 aa)
	KCNH7	Potassium voltage-gated channel subfamily H member 7. (1213 aa)
	ENSPKIP00000012415	Uncharacterized protein. (1200 aa)
	kcnh5	Potassium voltage-gated channel subfamily H member 5. (967 aa)
	hif1a	Hypoxia inducible factor 1 subunit alpha a. (753 aa)
	arntl2	Aryl hydrocarbon receptor nuclear translocator-like 2. (634 aa)
	LOC111834654	Neuronal PAS domain protein 4a. (926 aa)
	LOC111835686	Neuronal PAS domain protein 4 like. (761 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator-like 1a. (671 aa)
	epas1	Endothelial PAS domain protein 1b. (846 aa)
	NCOA3	Nuclear receptor coactivator 3. (1520 aa)
	LOC111835758	Potassium voltage-gated channel, subfamily H (eag-related), member 1a. (981 aa)
	LOC111859910	Aryl hydrocarbon receptor nuclear translocator 2. (708 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARNTL	Clock	ENSPKIP00000006197	ENSPKIP00000016926	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Clock circadian regulator a.	0.833
ARNTL	ENSPKIP00000018111	ENSPKIP00000006197	ENSPKIP00000018111	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Uncharacterized protein.	0.605
ARNTL	ENSPKIP00000022956	ENSPKIP00000006197	ENSPKIP00000022956	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Uncharacterized protein.	0.748
ARNTL	ENSPKIP00000035539	ENSPKIP00000006197	ENSPKIP00000035539	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Uncharacterized protein.	0.833
ARNTL	ENSPKIP00000038021	ENSPKIP00000006197	ENSPKIP00000038021	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Uncharacterized protein.	0.632
ARNTL	LOC111834002	ENSPKIP00000006197	ENSPKIP00000014817	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Aryl-hydrocarbon receptor repressor b.	0.632
ARNTL	LOC111834654	ENSPKIP00000006197	ENSPKIP00000009542	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Neuronal PAS domain protein 4a.	0.748
ARNTL	LOC111835686	ENSPKIP00000006197	ENSPKIP00000007138	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Neuronal PAS domain protein 4 like.	0.748
ARNTL	LOC111839067	ENSPKIP00000006197	ENSPKIP00000025614	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Aryl hydrocarbon receptor 1a.	0.632
ARNTL	LOC111844078	ENSPKIP00000006197	ENSPKIP00000023908	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Hypoxia inducible factor 1 subunit alpha, like.	0.605
ARNTL	LOC111844457	ENSPKIP00000006197	ENSPKIP00000001284	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Hypoxia inducible factor 1 subunit alpha.	0.605
ARNTL	LOC111845389	ENSPKIP00000006197	ENSPKIP00000026022	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Aryl hydrocarbon receptor 1b.	0.632
ARNTL	LOC111845405	ENSPKIP00000006197	ENSPKIP00000025967	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Aryl hydrocarbon receptor 2.	0.632
ARNTL	LOC111847548	ENSPKIP00000006197	ENSPKIP00000022115	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Period circadian clock 2.	0.753
ARNTL	LOC111854986	ENSPKIP00000006197	ENSPKIP00000014131	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Uncharacterized protein.	0.632
ARNTL	LOC111855872	ENSPKIP00000006197	ENSPKIP00000015422	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Uncharacterized protein.	0.507
ARNTL	LOC111859839	ENSPKIP00000006197	ENSPKIP00000001163	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Uncharacterized protein.	0.833
ARNTL	NPAS3	ENSPKIP00000006197	ENSPKIP00000015832	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Neuronal PAS domain protein 3.	0.605
ARNTL	PER2	ENSPKIP00000006197	ENSPKIP00000027401	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Period circadian regulator 2.	0.753
ARNTL	epas1	ENSPKIP00000006197	ENSPKIP00000005055	Aryl hydrocarbon receptor nuclear translocator-like 1a.	Endothelial PAS domain protein 1b.	0.605